RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 GPSM1Q86YR5 675 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 FAM185AQ8N0U4 392 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 SLC25A41Q8N5S1 370 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 PTGR2Q8N8N7 351 aaPredicted RBP3.82□□□□□ -1.8
CCDC58-203ENST00000466854 LRRC57Q8N9N7 239 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 OR8H1Q8NGG4 311 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 LILRB1Q8NHL6 650 aaPredicted RBP3.82□□□□□ -1.8
CCDC58-203ENST00000466854 SLC2A12Q8TD20 617 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 MIB2Q96AX9 1013 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 CCDC34Q96HJ3 373 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 TMEM204Q9BSN7 226 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 DDX23Q9BUQ8 820 aaKnown RBP3.82□□□□□ -1.8
CCDC58-203ENST00000466854 CADM1Q9BY67 442 aaKnown RBP3.82□□□□□ -1.8
CCDC58-203ENST00000466854 MRPL9Q9BYD2 267 aaKnown RBP3.82□□□□□ -1.8
CCDC58-203ENST00000466854 ARHGAP39Q9C0H5 1083 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.82□□□□□ -1.8
CCDC58-203ENST00000466854 RBM38Q9H0Z9 239 aaKnown RBP3.82□□□□□ -1.8
CCDC58-203ENST00000466854 MYLK2Q9H1R3 596 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 ABHD16BQ9H3Z7 469 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 HIPK3Q9H422 1215 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 PLEKHA5Q9HAU0 1116 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 SPAG4Q9NPE6 437 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 MRGBPQ9NV56 204 aa3.82□□□□□ -1.8
CCDC58-203ENST00000466854 MROH2AA6NES4 1674 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 SYNMO15061 1565 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 CPS1P31327 1500 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 NEO1Q92859 1461 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 RPS10-NUDT3A0A1W2PQS6 291 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 EME2A4GXA9 379 aaPredicted RBP3.81□□□□□ -1.8
CCDC58-203ENST00000466854 FAM90A20PA6NIJ5 464 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 BOLA2-SMG1P6H3BVE0 249 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 CBX6O95503 412 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 CYP1A2P05177 515 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 ACP5P13686 325 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 TYK2P29597 1187 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 MAPK9P45984 424 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 CD151P48509 253 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 TRPC1P48995 793 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 RPS6KA3P51812 740 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 PPP2R5CQ13362 524 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 ADCK5Q3MIX3 580 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 C5orf22Q49AR2 442 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 SLC45A4Q5BKX6 768 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 SLC16A12Q6ZSM3 486 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 Q6ZTK2 550 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 MCM10Q7L590 875 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 FASTKD5Q7L8L6 764 aaKnown RBP3.81□□□□□ -1.8
CCDC58-203ENST00000466854 KDELC2Q7Z4H8 507 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 CTU1Q7Z7A3 348 aaKnown RBP3.81□□□□□ -1.8
CCDC58-203ENST00000466854 CAMK1DQ8IU85 385 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 SCN4BQ8IWT1 228 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 SPATA5Q8NB90 893 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 C2CD4CQ8TF44 421 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 VMP1Q96GC9 406 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 IWS1Q96ST2 819 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 NPAS1Q99742 590 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 TSPY26PQ9H489 355 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 ACTR5Q9H9F9 607 aaPredicted RBP3.81□□□□□ -1.8
CCDC58-203ENST00000466854 DBNDD1Q9H9R9 158 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 IL21RQ9HBE5 538 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 PNRC2Q9NPJ4 139 aaKnown RBP3.81□□□□□ -1.8
CCDC58-203ENST00000466854 SIRT3Q9NTG7 399 aaPredicted RBP3.81□□□□□ -1.8
CCDC58-203ENST00000466854 THAP1Q9NVV9 213 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 TMEM248Q9NWD8 314 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 RRN3Q9NYV6 651 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 SEL1LQ9UBV2 794 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 PLEKHB1Q9UF11 243 aaPredicted RBP3.81□□□□□ -1.8
CCDC58-203ENST00000466854 RABL2BQ9UNT1 228 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 DHDHQ9UQ10 334 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 INSL5Q9Y5Q6 135 aa3.81□□□□□ -1.8
CCDC58-203ENST00000466854 WRNQ14191 1432 aaPredicted RBP eCLIP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 AKNAQ7Z591 1439 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 TMEM247A6NEH6 219 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 TMEM110-MUSTN1A8MSY1 372 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 STMND1H3BQB6 276 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 TNFRSF13BO14836 293 aaPredicted RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 IPO8O15397 1037 aaKnown RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 HTATSF1O43719 755 aaKnown RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 STRNO43815 780 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 DDX58O95786 925 aaKnown RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 TPM2P07951 284 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 CPA1P15085 419 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 VEGFAP15692 232 aaPredicted RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 AVPR2P30518 371 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 HOXA11P31270 313 aaPredicted RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 TNFSF8P32971 234 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 KIF5BP33176 963 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 SKIV2L2P42285 1042 aaKnown RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 ENTPD1P49961 510 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 UBASH3AP57075 661 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 IRX3P78415 501 aaPredicted RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 MAP2K1Q02750 393 aaPredicted RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 GOLGA8FQ08AF8 430 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 GPR18Q14330 331 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 PTPN14Q15678 1187 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 SMAD1Q15797 465 aaKnown RBP3.8□□□□□ -1.8
CCDC58-203ENST00000466854 PLK5Q496M5 336 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 ZNF484Q5JVG2 852 aa3.8□□□□□ -1.8
CCDC58-203ENST00000466854 TMEM268Q5VZI3 342 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms