RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 DNAJC19Q96DA6 116 aa9.59□□□□□ -0.87
APP-213ENST00000464867 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
APP-213ENST00000464867 ZNF587Q96SQ5 575 aaPredicted RBP9.59□□□□□ -0.87
APP-213ENST00000464867 LRRC61Q9BV99 259 aa9.59□□□□□ -0.87
APP-213ENST00000464867 ASPSCR1Q9BZE9 553 aa9.59□□□□□ -0.87
APP-213ENST00000464867 LRRC4Q9HBW1 653 aa9.59□□□□□ -0.87
APP-213ENST00000464867 PCDHGA3Q9Y5H0 932 aa9.59□□□□□ -0.87
APP-213ENST00000464867 CCDC168Q8NDH2 2452 aa9.59□□□□□ -0.87
APP-213ENST00000464867 ARHGAP10A1A4S6 786 aa9.58□□□□□ -0.88
APP-213ENST00000464867 K7ELQ4 463 aaPredicted RBP9.58□□□□□ -0.88
APP-213ENST00000464867 ZW10O43264 779 aa9.58□□□□□ -0.88
APP-213ENST00000464867 RAD1O60671 282 aa9.58□□□□□ -0.88
APP-213ENST00000464867 LDLRP01130 860 aa9.58□□□□□ -0.88
APP-213ENST00000464867 TCN2P20062 427 aa9.58□□□□□ -0.88
APP-213ENST00000464867 PDCP20941 246 aa9.58□□□□□ -0.88
APP-213ENST00000464867 NEK4P51957 841 aa9.58□□□□□ -0.88
APP-213ENST00000464867 TBX4P57082 545 aa9.58□□□□□ -0.88
APP-213ENST00000464867 SNRPFP62306 86 aaKnown RBP9.58□□□□□ -0.88
APP-213ENST00000464867 PPARDQ03181 441 aa9.58□□□□□ -0.88
APP-213ENST00000464867 ARHGEF7Q14155 803 aa9.58□□□□□ -0.88
APP-213ENST00000464867 DLG2Q15700 870 aa9.58□□□□□ -0.88
APP-213ENST00000464867 MAP9Q49MG5 647 aa9.58□□□□□ -0.88
APP-213ENST00000464867 DCAF6Q58WW2 860 aa9.58□□□□□ -0.88
APP-213ENST00000464867 RAB41Q5JT25 222 aa9.58□□□□□ -0.88
APP-213ENST00000464867 RRAGBQ5VZM2 374 aa9.58□□□□□ -0.88
APP-213ENST00000464867 CEP135Q66GS9 1140 aa9.58□□□□□ -0.88
APP-213ENST00000464867 C16orf46Q6P387 395 aa9.58□□□□□ -0.88
APP-213ENST00000464867 ERN2Q76MJ5 926 aaKnown RBP9.58□□□□□ -0.88
APP-213ENST00000464867 PIM3Q86V86 326 aa9.58□□□□□ -0.88
APP-213ENST00000464867 ZSCAN30Q86W11 494 aa9.58□□□□□ -0.88
APP-213ENST00000464867 GKN2Q86XP6 184 aa9.58□□□□□ -0.88
APP-213ENST00000464867 ANKMY2Q8IV38 441 aa9.58□□□□□ -0.88
APP-213ENST00000464867 HOMEZQ8IX15 550 aa9.58□□□□□ -0.88
APP-213ENST00000464867 TP53INP2Q8IXH6 220 aa9.58□□□□□ -0.88
APP-213ENST00000464867 PDCD6IPQ8WUM4 868 aaKnown RBP9.58□□□□□ -0.88
APP-213ENST00000464867 ELMO3Q96BJ8 720 aa9.58□□□□□ -0.88
APP-213ENST00000464867 PPP1R16AQ96I34 528 aa9.58□□□□□ -0.88
APP-213ENST00000464867 PRICKLE1Q96MT3 831 aaPredicted RBP9.58□□□□□ -0.88
APP-213ENST00000464867 FGFBP2Q9BYJ0 223 aa9.58□□□□□ -0.88
APP-213ENST00000464867 ULBP1Q9BZM6 244 aa9.58□□□□□ -0.88
APP-213ENST00000464867 IMPG2Q9BZV3 1241 aa9.58□□□□□ -0.88
APP-213ENST00000464867 GPR34Q9UPC5 381 aa9.58□□□□□ -0.88
APP-213ENST00000464867 ZFR2Q9UPR6 939 aaKnown RBP9.58□□□□□ -0.88
APP-213ENST00000464867 NAALADL1Q9UQQ1 740 aa9.58□□□□□ -0.88
APP-213ENST00000464867 SLC5A6Q9Y289 635 aa9.58□□□□□ -0.88
APP-213ENST00000464867 SHANK1Q9Y566 2161 aa9.58□□□□□ -0.88
APP-213ENST00000464867 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
APP-213ENST00000464867 HGSO14964 777 aaPredicted RBP9.57□□□□□ -0.88
APP-213ENST00000464867 CLIC2O15247 247 aa9.57□□□□□ -0.88
APP-213ENST00000464867 DUX1O43812 170 aa9.57□□□□□ -0.88
APP-213ENST00000464867 BMP15O95972 392 aa9.57□□□□□ -0.88
APP-213ENST00000464867 PRNPP04156 253 aa9.57□□□□□ -0.88
APP-213ENST00000464867 CCL4P13236 92 aa9.57□□□□□ -0.88
APP-213ENST00000464867 PNLIPP16233 465 aa9.57□□□□□ -0.88
APP-213ENST00000464867 GLB1P16278 677 aa9.57□□□□□ -0.88
APP-213ENST00000464867 CD58P19256 250 aa9.57□□□□□ -0.88
APP-213ENST00000464867 MAP4P27816 1152 aaKnown RBP9.57□□□□□ -0.88
APP-213ENST00000464867 OAS2P29728 719 aaKnown RBP9.57□□□□□ -0.88
APP-213ENST00000464867 ASPAP45381 313 aa9.57□□□□□ -0.88
APP-213ENST00000464867 LEPRP48357 1165 aaKnown RBP9.57□□□□□ -0.88
APP-213ENST00000464867 INCA1Q0VD86 236 aa9.57□□□□□ -0.88
APP-213ENST00000464867 C16orf72Q14CZ0 275 aa9.57□□□□□ -0.88
APP-213ENST00000464867 MS4A13Q5J8X5 152 aa9.57□□□□□ -0.88
APP-213ENST00000464867 CENPQQ7L2Z9 268 aaPredicted RBP9.57□□□□□ -0.88
APP-213ENST00000464867 KDELC2Q7Z4H8 507 aa9.57□□□□□ -0.88
APP-213ENST00000464867 SIX6OS1Q8N1H7 587 aa9.57□□□□□ -0.88
APP-213ENST00000464867 TMIEQ8NEW7 156 aa9.57□□□□□ -0.88
APP-213ENST00000464867 PCDH19Q8TAB3 1148 aa9.57□□□□□ -0.88
APP-213ENST00000464867 KCTD13Q8WZ19 329 aa9.57□□□□□ -0.88
APP-213ENST00000464867 NDRG1Q92597 394 aaKnown RBP9.57□□□□□ -0.88
APP-213ENST00000464867 LENG8Q96PV6 779 aaPredicted RBP9.57□□□□□ -0.88
APP-213ENST00000464867 TWNKQ96RR1 684 aa9.57□□□□□ -0.88
APP-213ENST00000464867 DDA1Q9BW61 102 aa9.57□□□□□ -0.88
APP-213ENST00000464867 TCEAL2Q9H3H9 227 aaPredicted RBP9.57□□□□□ -0.88
APP-213ENST00000464867 SEMA6CQ9H3T2 930 aa9.57□□□□□ -0.88
APP-213ENST00000464867 CYP3A43Q9HB55 503 aa9.57□□□□□ -0.88
APP-213ENST00000464867 AGPAT3Q9NRZ7 376 aa9.57□□□□□ -0.88
APP-213ENST00000464867 DMGDHQ9UI17 866 aaKnown RBP9.57□□□□□ -0.88
APP-213ENST00000464867 ERRFI1Q9UJM3 462 aaPredicted RBP9.57□□□□□ -0.88
APP-213ENST00000464867 APPL1Q9UKG1 709 aa9.57□□□□□ -0.88
APP-213ENST00000464867 ITGB1BP2Q9UKP3 347 aa9.57□□□□□ -0.88
APP-213ENST00000464867 LIMCH1Q9UPQ0 1083 aa9.57□□□□□ -0.88
APP-213ENST00000464867 TCP11X1B4DZS4 312 aa9.56□□□□□ -0.88
APP-213ENST00000464867 SPTLC2O15270 562 aa9.56□□□□□ -0.88
APP-213ENST00000464867 RAD51BO15315 384 aa9.56□□□□□ -0.88
APP-213ENST00000464867 EXOC3O60645 756 aa9.56□□□□□ -0.88
APP-213ENST00000464867 RFPL1O75677 317 aa9.56□□□□□ -0.88
APP-213ENST00000464867 CPNE6O95741 557 aa9.56□□□□□ -0.88
APP-213ENST00000464867 C4BPAP04003 597 aaKnown RBP9.56□□□□□ -0.88
APP-213ENST00000464867 PRF1P14222 555 aa9.56□□□□□ -0.88
APP-213ENST00000464867 PDGFRAP16234 1089 aa9.56□□□□□ -0.88
APP-213ENST00000464867 CHRNA3P32297 505 aa9.56□□□□□ -0.88
APP-213ENST00000464867 CASP4P49662 377 aa9.56□□□□□ -0.88
APP-213ENST00000464867 NUMBP49757 651 aa9.56□□□□□ -0.88
APP-213ENST00000464867 YPEL5P62699 121 aa9.56□□□□□ -0.88
APP-213ENST00000464867 IRX6P78412 446 aaPredicted RBP9.56□□□□□ -0.88
APP-213ENST00000464867 MRPL49Q13405 166 aaKnown RBP9.56□□□□□ -0.88
APP-213ENST00000464867 DCAF12Q5T6F0 453 aa9.56□□□□□ -0.88
APP-213ENST00000464867 NADSYN1Q6IA69 706 aa9.56□□□□□ -0.88
APP-213ENST00000464867 SLITRK4Q8IW52 837 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms