RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GBE1Q04446 702 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 GRIK2Q13002 908 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 PUM1Q14671 1186 aaKnown RBP eCLIP17.24■□□□□ 0.35
VPS52-215ENST00000464425 LRRC73Q5JTD7 316 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 TMCO4Q5TGY1 634 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 SRLQ86TD4 932 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 TTC7BQ86TV6 843 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 UBL4BQ8N7F7 174 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 EXD1Q8NHP7 514 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 KRT35Q92764 455 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 SERAC1Q96JX3 654 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 ZNF599Q96NL3 588 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 RTKNQ9BST9 563 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 MAK16Q9BXY0 300 aaKnown RBP17.24■□□□□ 0.35
VPS52-215ENST00000464425 CPEB1Q9BZB8 566 aaKnown RBP17.24■□□□□ 0.35
VPS52-215ENST00000464425 AASDHPPTQ9NRN7 309 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 SEPT3Q9UH03 358 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 FADS3Q9Y5Q0 445 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 DCHS1Q96JQ0 3298 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 ADAMTS9Q9P2N4 1935 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 LATO43561 262 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 FTCDO95954 541 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 ABL2P42684 1182 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 SCNN1BP51168 640 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 RWDD2BP57060 319 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 RACK1P63244 317 aaKnown RBP17.23■□□□□ 0.35
VPS52-215ENST00000464425 BNC1Q01954 994 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 GALNT2Q10471 571 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 SLC10A2Q12908 348 aaPredicted RBP17.23■□□□□ 0.35
VPS52-215ENST00000464425 ZNF235Q14590 738 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 LLGL1Q15334 1064 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 TEAD4Q15561 434 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 TAZQ16635 292 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 MEI1Q5TIA1 1274 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 SEL1L3Q68CR1 1132 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 NEK5Q6P3R8 708 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 ADAT2Q7Z6V5 191 aaKnown RBP17.23■□□□□ 0.35
VPS52-215ENST00000464425 TRIM69Q86WT6 500 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 HORMAD1Q86X24 394 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 CAMK1DQ8IU85 385 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 MINDY1Q8N5J2 469 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.23■□□□□ 0.35
VPS52-215ENST00000464425 NSMCE1Q8WV22 266 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 PSKH2Q96QS6 385 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 SUV39H2Q9H5I1 410 aa17.23■□□□□ 0.35
VPS52-215ENST00000464425 USP27XA6NNY8 438 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 NEMP1O14524 444 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 SLC31A1O15431 190 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 KIF5CO60282 957 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 TIMP2P16035 220 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 PRLRP16471 622 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 ITIH2P19823 946 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 MSNP26038 577 aaKnown RBP17.22■□□□□ 0.35
VPS52-215ENST00000464425 GARSP41250 739 aaKnown RBP17.22■□□□□ 0.35
VPS52-215ENST00000464425 CSNK1DP48730 415 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 RENBPP51606 427 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 COPS2P61201 443 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 NSUN2Q08J23 767 aaKnown RBP eCLIP17.22■□□□□ 0.35
VPS52-215ENST00000464425 KIF19Q2TAC6 998 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 ZNF284Q2VY69 593 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 SETMARQ53H47 684 aaPredicted RBP17.22■□□□□ 0.35
VPS52-215ENST00000464425 MFSD7Q6UXD7 560 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 RFX6Q8HWS3 928 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 LRRC49Q8IUZ0 686 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 PGBD5Q8N414 524 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 TRIM44Q96DX7 344 aaPredicted RBP17.22■□□□□ 0.35
VPS52-215ENST00000464425 RBM41Q96IZ5 413 aaKnown RBP17.22■□□□□ 0.35
VPS52-215ENST00000464425 GGT7Q9UJ14 662 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 TPX2Q9ULW0 747 aaKnown RBP17.22■□□□□ 0.35
VPS52-215ENST00000464425 ZFR2Q9UPR6 939 aaKnown RBP17.22■□□□□ 0.35
VPS52-215ENST00000464425 ITM2BQ9Y287 266 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 CA5BQ9Y2D0 317 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 ANKRD6Q9Y2G4 727 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 SNX11Q9Y5W9 270 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 CACNA1EQ15878 2313 aa17.22■□□□□ 0.35
VPS52-215ENST00000464425 KCNK3O14649 394 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 APOL1O14791 398 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 DDX3YO15523 660 aaKnown RBP17.21■□□□□ 0.35
VPS52-215ENST00000464425 WNT1P04628 370 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 CDKN2BP42772 138 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 MMP13P45452 471 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 GRIA4P48058 902 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 MARCKSL1P49006 195 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 MAXP61244 160 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 DYNLT1P63172 113 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 GRM3Q14832 879 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 HLA-BQ31612 363 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 TFDP3Q5H9I0 405 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 CFAP58Q5T655 872 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 MARC1Q5VT66 337 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 NAPEPLDQ6IQ20 393 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 DGLUCYQ7Z3D6 616 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 BBS5Q8N3I7 341 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 PLD5Q8N7P1 536 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 ALG3Q92685 438 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 RAB7BQ96AH8 199 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 FEM1CQ96JP0 617 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 NSMCE3Q96MG7 304 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 TUBGCP5Q96RT8 1024 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms