RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 RIOK3O14730 519 aaKnown RBP23.05■■□□□ 1.28
PTPN4-207ENST00000460162 PSMA2P25787 234 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 DUSP3P51452 185 aaPredicted RBP23.05■■□□□ 1.28
PTPN4-207ENST00000460162 NDST2P52849 883 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 GRM3Q14832 879 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 ZCCHC8Q6NZY4 707 aaKnown RBP23.05■■□□□ 1.28
PTPN4-207ENST00000460162 TTC7BQ86TV6 843 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 CXorf40AQ8TE69 158 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 HNRNPLLQ8WVV9 542 aaKnown RBP23.05■■□□□ 1.28
PTPN4-207ENST00000460162 CENPTQ96BT3 561 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 NCAPGQ9BPX3 1015 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 PDFQ9HBH1 243 aa23.05■■□□□ 1.28
PTPN4-207ENST00000460162 LRRK1Q38SD2 2015 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 IGSF10Q6WRI0 2623 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 TSPAN11A1L157 253 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 SMTNL1A8MU46 457 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 TOR1BO14657 336 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 TM7SF2O76062 418 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 IGFALSP35858 605 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 THOP1P52888 689 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 ELP6Q0PNE2 266 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 PTK2BQ14289 1009 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 ASIC2Q16515 512 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 FILIP1LQ4L180 1135 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 LRRC73Q5JTD7 316 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 TPRG1LQ5T0D9 272 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 DNAAF5Q86Y56 855 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 FNIP1Q8TF40 1166 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 BTN2A2Q8WVV5 523 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 EXOC2Q96KP1 924 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 CAAP1Q9H8G2 361 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 NCKIPSDQ9NZQ3 722 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 AK5Q9Y6K8 562 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 ATRXP46100 2492 aa23.04■■□□□ 1.28
PTPN4-207ENST00000460162 LY6G6EA0A0G2JKS1 128 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 A0A1W2PQC6 194 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 TMCO5BA8MYB1 307 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 ATMINO43313 823 aaPredicted RBP23.03■■□□□ 1.28
PTPN4-207ENST00000460162 AQP9O43315 295 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 NEBLO76041 1014 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 MT-CO3P00414 261 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 JUNDP17535 347 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 PRKCIP41743 596 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 YPEL5P62699 121 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 VPS36Q86VN1 386 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 HCAR2Q8TDS4 363 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 TBATAQ96M53 351 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 DHX35Q9H5Z1 703 aaKnown RBP23.03■■□□□ 1.28
PTPN4-207ENST00000460162 GPATCH2LQ9NWQ4 482 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 U3KQA8 63 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 ANKRD36A6QL64 1941 aa23.03■■□□□ 1.28
PTPN4-207ENST00000460162 LOC400499M0QZD8 3231 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 EEF2KO00418 725 aaKnown RBP23.02■■□□□ 1.28
PTPN4-207ENST00000460162 PRAMEF11O60813 436 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 PIGNO95427 931 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 GZMAP12544 262 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 XPAP23025 273 aaPredicted RBP23.02■■□□□ 1.28
PTPN4-207ENST00000460162 ABCG1P45844 678 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 SEMG2Q02383 582 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 EIF2B5Q13144 721 aaKnown RBP23.02■■□□□ 1.28
PTPN4-207ENST00000460162 CYTH1Q15438 398 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 CDCP2Q5VXM1 449 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 MACC1Q6ZN28 852 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 TP53I13Q8NBR0 393 aaPredicted RBP23.02■■□□□ 1.28
PTPN4-207ENST00000460162 NETO2Q8NC67 525 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 SNIP1Q8TAD8 396 aaKnown RBP23.02■■□□□ 1.28
PTPN4-207ENST00000460162 DCBLD2Q96PD2 775 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 SNRNP25Q9BV90 132 aaKnown RBP23.02■■□□□ 1.28
PTPN4-207ENST00000460162 HAUS4Q9H6D7 363 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 AIPL1Q9NZN9 384 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 APOBEC3BQ9UH17 382 aaKnown RBP23.02■■□□□ 1.28
PTPN4-207ENST00000460162 KLF15Q9UIH9 416 aa23.02■■□□□ 1.28
PTPN4-207ENST00000460162 TMEM191CA6NGB0 347 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 ARHGAP42A6NI28 874 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 TPP1O14773 563 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 INSIG1O15503 277 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 OPA1O60313 960 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 MMP20O60882 483 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 RNF8O76064 485 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 HOXB3P14651 431 aaPredicted RBP23.01■■□□□ 1.27
PTPN4-207ENST00000460162 TIMP2P16035 220 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 ZNF135P52742 658 aaPredicted RBP23.01■■□□□ 1.27
PTPN4-207ENST00000460162 TMEM52BQ4KMG9 183 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 ERMARDQ5T6L9 678 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 E4F1Q66K89 784 aaPredicted RBP23.01■■□□□ 1.27
PTPN4-207ENST00000460162 KDM7AQ6ZMT4 941 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 RFX8Q6ZV50 586 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 PSTKQ8IV42 348 aaKnown RBP23.01■■□□□ 1.27
PTPN4-207ENST00000460162 PHACTR4Q8IZ21 702 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 ZNF641Q96N77 438 aaPredicted RBP23.01■■□□□ 1.27
PTPN4-207ENST00000460162 DEPDC7Q96QD5 511 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 TUBGCP5Q96RT8 1024 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 PEBP4Q96S96 227 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 WRAP53Q9BUR4 548 aaKnown RBP23.01■■□□□ 1.27
PTPN4-207ENST00000460162 SPASTQ9UBP0 616 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 SALL4Q9UJQ4 1053 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 SCINQ9Y6U3 715 aa23.01■■□□□ 1.27
PTPN4-207ENST00000460162 COL27A1Q8IZC6 1860 aaPredicted RBP23■■□□□ 1.27
PTPN4-207ENST00000460162 LRP4O75096 1905 aa23■■□□□ 1.27
PTPN4-207ENST00000460162 A0A1B0GTH6 734 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms