RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 FBXL22Q6P050 247 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 CYP2R1Q6VVX0 501 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SH2D5Q6ZV89 423 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SCD5Q86SK9 330 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 FAM124BQ9H5Z6 455 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 ENTPD7Q9NQZ7 604 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 ZDHHC2Q9UIJ5 367 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 ARL5AQ9Y689 179 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 PRSS56P0CW18 603 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 ALDH7A1P49419 539 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 CTC1Q2NKJ3 1217 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 WLSQ5T9L3 541 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 GBP5Q96PP8 586 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 UBE2OQ9C0C9 1292 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 RHOBTB1O94844 696 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 CKBP12277 381 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 CHRM3P20309 590 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 KLF10Q13118 480 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 CYLC2Q14093 348 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 FLOT2Q14254 428 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 PFKFB4Q16877 469 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 LSM12Q3MHD2 195 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 OR13C4Q8NGS5 318 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 LRGUKQ96M69 825 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 TM6SF2Q9BZW4 377 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 ABCG8Q9H221 673 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 FBXO44Q9H4M3 255 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 EIF2B3Q9NR50 452 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 PPM1HQ9ULR3 514 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 PCDHGC4Q9Y5F7 938 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 PRRG1O14668 218 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 PSMD3O43242 534 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 CA12O43570 354 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 NDUFS3O75489 264 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 RAG1P15918 1043 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 CCNCP24863 283 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 ARRB2P32121 409 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 MAGEA3P43357 314 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 HARS2P49590 506 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 STX1BP61266 288 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 PIK3R6Q5UE93 754 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 IGSF8Q969P0 613 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 ERLEC1Q96DZ1 483 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 DNAJC1Q96KC8 554 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 PANX3Q96QZ0 392 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 EBF2Q9HAK2 575 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 GIMAP2Q9UG22 337 aa12.08□□□□□ -0.48
SMPD4-213ENST00000454468 AFF4Q9UHB7 1163 aaKnown RBP12.08□□□□□ -0.48
SMPD4-213ENST00000454468 MGAMO43451 1857 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 A0A0D9SEW6 157 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 MAFKO60675 156 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 CYBAP13498 195 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 ANPEPP15144 967 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 CCNFP41002 786 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 ABL2P42684 1182 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 AGAP9Q5VTM2 703 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 TMEM135Q86UB9 458 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 CARNMT1Q8N4J0 409 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 RTL3Q8N8U3 475 aaKnown RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 APBB2Q92870 758 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 HBEGFQ99075 208 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 CINPQ9BW66 212 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.07□□□□□ -0.484e-7■■■□□ 17.2
SMPD4-213ENST00000454468 MTF2Q9Y483 593 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 TCAF1Q9Y4C2 921 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 HEATR9A2RTY3 570 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 E5RI56 91 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 HDAC3O15379 428 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 DLX3O60479 287 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 GLP2RO95838 553 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 JUNP05412 331 aaKnown RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 CD1EP15812 388 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 KPNA2P52292 529 aaKnown RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 MLLT6P55198 1093 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 PLD1Q13393 1074 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 LIPMQ5VYY2 423 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 GK5Q6ZS86 529 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 MRPL46Q9H2W6 279 aaKnown RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 ATP13A1Q9HD20 1204 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 PTPRFP10586 1907 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 HHLA1C9JL84 531 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 FGF10O15520 208 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 ZBTB14O43829 449 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 TM7SF2O76062 418 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 C1QAP02745 245 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 SLC2A3P11169 496 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 TRMT5Q32P41 509 aaKnown RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 RAB44Q7Z6P3 723 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-213ENST00000454468 LZTR1Q8N653 840 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 ICA1LQ8NDH6 482 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 KLHDC9Q8NEP7 349 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 AUTS2Q8WXX7 1259 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 NT5C3BQ969T7 300 aa12.07□□□□□ -0.48
SMPD4-213ENST00000454468 BTRCQ9Y297 605 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms