RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TGFBR2P37173 567 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 RFX3P48380 749 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 GPR15P49685 360 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 CYP4F2P78329 520 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 CYP4F3Q08477 520 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 FAM131AQ6UXB0 335 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 TAMM41Q96BW9 452 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 FDXACB1Q9BRP7 624 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 COG5Q9UP83 839 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 H3BRB1 525 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 CSDE1O75534 798 aaKnown RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 MTRF1O75570 445 aaKnown RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 DARSP14868 501 aaKnown RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 USP4Q13107 963 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 PRKG2Q13237 762 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 PFKFB4Q16877 469 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 FBXO47Q5MNV8 452 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 GPSM1Q86YR5 675 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 SYT12Q8IV01 421 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 MOSPD2Q8NHP6 518 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 TUT1Q9H6E5 874 aaKnown RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 UPP2O95045 317 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 PEX2P28328 305 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 PCID2Q5JVF3 399 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 LDLRAP1Q5SW96 308 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 NEK5Q6P3R8 708 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 RASSF6Q6ZTQ3 369 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 BBS12Q6ZW61 710 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 MAP4K3Q8IVH8 894 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 BRSK2Q8IWQ3 736 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 ARMC7Q9H6L4 198 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 AAASQ9NRG9 546 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 ZNF224Q9NZL3 707 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 EGFL7Q9UHF1 273 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 MAGEL2Q9UJ55 1249 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 FAM240BA0A1B0GVZ2 78 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 VTNP04004 478 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 ZNF7P17097 686 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 GRK4P32298 578 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 HPCAL1P37235 193 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 TKTL1P51854 596 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 SLC1A5Q15758 541 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 PTGR2Q8N8N7 351 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 ALG3Q92685 438 aa18.76■□□□□ 0.59
SHANK3-203ENST00000445220 L3MBTL3Q96JM7 780 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-203ENST00000445220 IFRD1O00458 451 aaPredicted RBP18.75■□□□□ 0.59
SHANK3-203ENST00000445220 HGFP14210 728 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 CYP2A7P20853 494 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 SLC12A3P55017 1021 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 TPTEP56180 551 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 NFE2Q16621 373 aaPredicted RBP18.75■□□□□ 0.59
SHANK3-203ENST00000445220 PCSK9Q8NBP7 692 aaKnown RBP18.75■□□□□ 0.59
SHANK3-203ENST00000445220 SLC7A5P2Q9GIP4 190 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 OPTCQ9UBM4 332 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 G3V2T6 193 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 POLD2P49005 469 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 ALDH7A1P49419 539 aaKnown RBP18.75■□□□□ 0.59
SHANK3-203ENST00000445220 GCNT7Q6ZNI0 430 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 SLC41A1Q8IVJ1 513 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 FAM71AQ8IYT1 594 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 NPAS2Q99743 824 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 CAPN10Q9HC96 672 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 PTGFRNQ9P2B2 879 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 BAIAP2Q9UQB8 552 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 PLLPQ9Y342 182 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 SAMHD1Q9Y3Z3 626 aaKnown RBP18.75■□□□□ 0.59
SHANK3-203ENST00000445220 C5orf60A6NFR6 353 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 SIGLEC16A6NMB1 481 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 ITGA2P17301 1181 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 SLC6A3Q01959 620 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 PLCL1Q15111 1095 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 IRF2BP2Q7Z5L9 587 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 EBF3Q9H4W6 596 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 PRELID1Q9Y255 219 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 DDX3YO15523 660 aaKnown RBP18.75■□□□□ 0.59
SHANK3-203ENST00000445220 NRP2O60462 931 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 CABYRO75952 493 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 YWHAZP63104 245 aaKnown RBP18.75■□□□□ 0.59
SHANK3-203ENST00000445220 CARTPTQ16568 116 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 OR52K1Q8NGK4 314 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 CYP2W1Q8TAV3 490 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 LRRC4CQ9HCJ2 640 aa18.75■□□□□ 0.59
SHANK3-203ENST00000445220 ACKR2O00590 384 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 CXCL8P10145 99 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 COX7A2P14406 83 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 MED22Q15528 200 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 KCNK18Q7Z418 384 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 OR2T34Q8NGX1 318 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 OR2T3Q8NH03 318 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 KAT5Q92993 513 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 FAM92AA1XBS5 289 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 PIAS1O75925 651 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 MSX2P35548 267 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-203ENST00000445220 CCNFP41002 786 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 NDST1P52848 882 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 GMFBP60983 142 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 COPZ1P61923 177 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 ARHGAP15Q53QZ3 475 aa18.74■□□□□ 0.59
SHANK3-203ENST00000445220 RUNDC3AQ59EK9 446 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms