RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 LHX3Q9UBR4 397 aa12.4□□□□□ -0.42
LTBR-204ENST00000444814 EIF2B4Q9UI10 523 aaKnown RBP12.4□□□□□ -0.42
LTBR-204ENST00000444814 SARDHQ9UL12 918 aa12.4□□□□□ -0.42
LTBR-204ENST00000444814 REXO2Q9Y3B8 237 aaKnown RBP12.4□□□□□ -0.42
LTBR-204ENST00000444814 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
LTBR-204ENST00000444814 DFNA5O60443 496 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 TJP3O95049 919 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 AKT2P31751 481 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 CDKN2BP42772 138 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 GRIA4P48058 902 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 OVGP1Q12889 678 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 STAT4Q14765 748 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 ZNF662Q6ZS27 426 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 HORMAD1Q86X24 394 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 TTC13Q8NBP0 860 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 OR6K2Q8NGY2 324 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 CXorf40AQ8TE69 158 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 ARRDC3Q96B67 414 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 NUDCD1Q96RS6 583 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 CD93Q9NPY3 652 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 AASDHPPTQ9NRN7 309 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 ETNK2Q9NVF9 386 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 SERGEFQ9UGK8 458 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 GUCA1BQ9UMX6 200 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 HYOU1Q9Y4L1 999 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 HACD1B0YJ81 288 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 PRAMEF26H0Y7S4 382 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 ZSCAN12O43309 604 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 CST8O60676 142 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 STK10O94804 968 aaKnown RBP12.39□□□□□ -0.43
LTBR-204ENST00000444814 CER1O95813 267 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 CCNB1P14635 433 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 LIMK1P53667 647 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 DYNLT1P63172 113 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 PPIDQ08752 370 aaKnown RBP12.39□□□□□ -0.43
LTBR-204ENST00000444814 SLC10A7Q0GE19 358 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 AP1B1Q10567 949 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 PIP5KL1Q5T9C9 394 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 KAZNQ674X7 775 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 NAPEPLDQ6IQ20 393 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 MFSD7Q6UXD7 560 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 PARS2Q7L3T8 475 aaKnown RBP12.39□□□□□ -0.43
LTBR-204ENST00000444814 ZCCHC9Q8N567 271 aaKnown RBP12.39□□□□□ -0.43
LTBR-204ENST00000444814 OXR1Q8N573 874 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 PQLC3Q8N755 202 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 PLD5Q8N7P1 536 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 TSEN2Q8NCE0 465 aaKnown RBP12.39□□□□□ -0.43
LTBR-204ENST00000444814 TRIM58Q8NG06 486 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 TFB1MQ8WVM0 346 aaKnown RBP12.39□□□□□ -0.43
LTBR-204ENST00000444814 LRRC45Q96CN5 670 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 SERAC1Q96JX3 654 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 EXOC2Q96KP1 924 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 VAT1Q99536 393 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 EDEM2Q9BV94 578 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 TMEM9BQ9NQ34 198 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 RBM22Q9NW64 420 aaKnown RBP eCLIP12.39□□□□□ -0.43
LTBR-204ENST00000444814 KCTD5Q9NXV2 234 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 DTLQ9NZJ0 730 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 ACTL7AQ9Y615 435 aa12.39□□□□□ -0.43
LTBR-204ENST00000444814 ATXN2Q99700 1313 aaKnown RBP12.38□□□□□ -0.43
LTBR-204ENST00000444814 GRID2IPA4D2P6 1211 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 RCCD1A6NED2 376 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 C3orf70A6NLC5 250 aaPredicted RBP12.38□□□□□ -0.43
LTBR-204ENST00000444814 UPK3BL1B0FP48 263 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 UPK3BL2E5RIL1 263 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 ARHGAP33O14559 1287 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 INSIG1O15503 277 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 PTPN7P35236 360 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 ARHGAP36Q6ZRI8 547 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 NT5DC3Q86UY8 548 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 IQCHQ86VS3 1027 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 CPNE8Q86YQ8 564 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 TEX26Q8N6G2 289 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 LRRC57Q8N9N7 239 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 MAML1Q92585 1016 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 PPP1R2P1Q96PQ5 205 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 RTKNQ9BST9 563 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 NT5MQ9NPB1 228 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 TFR2Q9UP52 801 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 TTLL3Q9Y4R7 772 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 DUSP10Q9Y6W6 482 aa12.38□□□□□ -0.43
LTBR-204ENST00000444814 hCG_1818297A0A087WSY0 165 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 A0A1W2PQU0 124 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 TSPAN11A1L157 253 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 APOC4-APOC2K7ER74 178 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 TOR1BO14657 336 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 YKT6O15498 198 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 LATO43561 262 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 APOC2P02655 101 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 CYP2A6P11509 494 aaPredicted RBP12.37□□□□□ -0.43
LTBR-204ENST00000444814 HNRNPA2B1P22626 353 aaKnown RBP12.37□□□□□ -0.43
LTBR-204ENST00000444814 MAOBP27338 520 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 CD38P28907 300 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
LTBR-204ENST00000444814 GBE1Q04446 702 aa12.37□□□□□ -0.43
LTBR-204ENST00000444814 XRCC4Q13426 336 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms