RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PCLAFQ15004 111 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 PPM1JQ5JR12 505 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 MBLAC2Q68D91 279 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 C16orf46Q6P387 395 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 ZFRQ96KR1 1074 aaKnown RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 ZBED2Q9BTP6 218 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 EMILIN2Q9BXX0 1053 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 MFSD1Q9H3U5 465 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 ZNF334Q9HCZ1 680 aaPredicted RBP15.82■□□□□ 0.12
SNX13-204ENST00000444712 SLC2A6Q9UGQ3 507 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 CHKBQ9Y259 395 aa15.82■□□□□ 0.12
SNX13-204ENST00000444712 A0A0G2JND7 137 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 CCDC195A0A1B0GUA6 201 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 FAM95CA0A1B0GW59 222 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 TGM5O43548 720 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 HNRNPCL1O60812 293 aaKnown RBP15.81■□□□□ 0.12
SNX13-204ENST00000444712 CNPP09543 421 aaKnown RBP15.81■□□□□ 0.12
SNX13-204ENST00000444712 DLDP09622 509 aaKnown RBP15.81■□□□□ 0.12
SNX13-204ENST00000444712 CPA3P15088 417 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 STMN1P16949 149 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 CLCN5P51795 746 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 SLC12A2P55011 1212 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 RAB10P61026 200 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 PRAMEP78395 509 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 POU4F1Q01851 419 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 NSUN2Q08J23 767 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNX13-204ENST00000444712 TSNAXIP1Q2TAA8 658 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 RNF219Q5W0B1 726 aaPredicted RBP15.81■□□□□ 0.12
SNX13-204ENST00000444712 BRSK1Q8TDC3 778 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 PPP4R1Q8TF05 950 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 ERP27Q96DN0 273 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 TUBB6Q9BUF5 446 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 MYLK2Q9H1R3 596 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 ECT2Q9H8V3 914 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 GGT7Q9UJ14 662 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 ZFP69BQ9UJL9 534 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 DCTN4Q9UJW0 460 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 LZTS1Q9Y250 596 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 ANKRD36A6QL64 1941 aa15.81■□□□□ 0.12
SNX13-204ENST00000444712 A0A087X1B8 175 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 H0Y626 953 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 INSIG1O15503 277 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 TSPAN3O60637 253 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 TOP3BO95985 862 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 C1RP00736 705 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 FGF3P11487 239 aaPredicted RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 GABRR2P28476 465 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 RASSF2P50749 326 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 IRX4P78413 519 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 ACVR1Q04771 509 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 CTBP1Q13363 440 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 RALGPS1Q5JS13 557 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 CXorf57Q6NSI4 855 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 Q6ZNB5 142 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 RTL10Q7L3V2 364 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 WDR75Q8IWA0 830 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 DENND6AQ8IWF6 608 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 FAM217AQ8IXS0 508 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 RFWD2Q8NHY2 731 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 TSPAN17Q96FV3 270 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 TMEM120AQ9BXJ8 343 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 STN1Q9H668 368 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 NMRAL1Q9HBL8 299 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 SCUBE2Q9NQ36 999 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 SMPD4Q9NXE4 827 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.8■□□□□ 0.12
SNX13-204ENST00000444712 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 ACOT9Q9Y305 439 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 CPQQ9Y646 472 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 CBX4O00257 560 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 MUSKO15146 869 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 TBL1XO60907 577 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 DNAJC6O75061 913 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 LUC7L3O95232 432 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 CXCL14O95715 111 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 CRTAMO95727 393 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 GSRP00390 522 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 HSPA8P11142 646 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 RALBP11234 206 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 HOXB8P17481 243 aaPredicted RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 LEPRP48357 1165 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 SGSHP51688 502 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 SLC7A9P82251 487 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 MPP1Q00013 466 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 INO80DQ53TQ3 878 aaPredicted RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 TMC7Q7Z402 723 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 ARL14EPQ8N8R7 260 aaPredicted RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 OR52K2Q8NGK3 314 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 OR13J1Q8NGT2 312 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 STYXQ8WUJ0 223 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 TMA16Q96EY4 203 aaKnown RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 NUDCD1Q96RS6 583 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 WWP1Q9H0M0 922 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 CAB39LQ9H9S4 337 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 SAR1AQ9NR31 198 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 CORO1CQ9ULV4 474 aaPredicted RBP15.8■□□□□ 0.12
SNX13-204ENST00000444712 IRAK3Q9Y616 596 aa15.8■□□□□ 0.12
SNX13-204ENST00000444712 TRAV19A0A0A6YYK7 116 aa15.79■□□□□ 0.12
SNX13-204ENST00000444712 UNC5CO95185 931 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms