RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 SDC3O75056 442 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 PROSCO94903 275 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 TNNT1P13805 278 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 SCNN1BP51168 640 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 BCL2L1Q07817 233 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 ELP6Q0PNE2 266 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 DPYSQ14117 519 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 RFTN1Q14699 578 aaPredicted RBP16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 LBRQ14739 615 aaKnown RBP16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 ARHGAP36Q6ZRI8 547 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 CYP4V2Q6ZWL3 525 aaPredicted RBP16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 POLNQ7Z5Q5 900 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 SRLQ86TD4 932 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 EID2Q8N6I1 236 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 PNPLA1Q8N8W4 532 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 PDCD6IPQ8WUM4 868 aaKnown RBP16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 SCNM1Q9BWG6 230 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 HAUS2Q9NVX0 235 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 GGT7Q9UJ14 662 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 TTLL3Q9Y4R7 772 aa16.96■□□□□ 0.31
TSPAN9-204ENST00000444315 PCNX2A6NKB5 2137 aa16.96■□□□□ 0.3
TSPAN9-204ENST00000444315 TM7SF2O76062 418 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 KRT7P08729 469 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 TMEM253P0C7T8 217 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 EPHA8P29322 1005 aaPredicted RBP16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 THOP1P52888 689 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 SLC25A11Q02978 314 aaKnown RBP16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 ITKQ08881 620 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 TXNRD3NBQ6F5E7 133 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 Q6ZSR6 202 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 CHCHD4Q8N4Q1 142 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 TSEN2Q8NCE0 465 aaKnown RBP16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 OR13H1Q8NG92 308 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 FAM174AQ8TBP5 190 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 ZNF830Q96NB3 372 aaPredicted RBP16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 SUV39H2Q9H5I1 410 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 PDFQ9HBH1 243 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 SCUBE2Q9NQ36 999 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 DNAJC28Q9NX36 388 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 MFHAS1Q9Y4C4 1052 aa16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 TDRD6O60522 2096 aaKnown RBP16.95■□□□□ 0.3
TSPAN9-204ENST00000444315 H3BM21 787 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 LZTS3O60299 673 aaPredicted RBP16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 MMP20O60882 483 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 LDOC1O95751 146 aaPredicted RBP16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 NOP2P46087 812 aaKnown RBP16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 MMRN1Q13201 1228 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 TMEM259Q4ZIN3 620 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 CAMK1DQ8IU85 385 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 ARHGAP12Q8IWW6 846 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 CNDP2Q96KP4 475 aaKnown RBP16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 ZNF641Q96N77 438 aaPredicted RBP16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 ZNF599Q96NL3 588 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 TUBGCP5Q96RT8 1024 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 CHP1Q99653 195 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 CPEB1Q9BZB8 566 aaKnown RBP16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 ERVMER34-1Q9H9K5 563 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 LUC7LQ9NQ29 371 aaKnown RBP16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 CABIN1Q9Y6J0 2220 aa16.94■□□□□ 0.3
TSPAN9-204ENST00000444315 FFAR2O15552 330 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 TNFSF14O43557 240 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 IPO7O95373 1038 aaKnown RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 TOP3BO95985 862 aaKnown RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 ALPPL2P10696 532 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 NFKBIAP25963 317 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 RABIFP47224 123 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 SUOXP51687 545 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 SHC2P98077 582 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 DAB2P98082 770 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 BNIP3Q12983 259 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 PDE1CQ14123 709 aaPredicted RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 PDK2Q15119 407 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 BRAT1Q6PJG6 821 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 KYAT3Q6YP21 454 aaKnown RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 GCNT7Q6ZNI0 430 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 SPATS2Q86XZ4 545 aaKnown RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 DCP2Q8IU60 420 aaKnown RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 RHOT2Q8IXI1 618 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 TMEM145Q8NBT3 493 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 SLC35G2Q8TBE7 412 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 MAK16Q9BXY0 300 aaKnown RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 ETNK2Q9NVF9 386 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 RCOR3Q9P2K3 495 aaPredicted RBP16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 DKK3Q9UBP4 350 aa16.93■□□□□ 0.3
TSPAN9-204ENST00000444315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 ENC1O14682 589 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 SPOPO43791 374 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 PRKCGP05129 697 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 ATXN1LP0C7T5 689 aaKnown RBP16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 TIMP2P16035 220 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 HSPA9P38646 679 aaKnown RBP16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 MMP13P45452 471 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 AP1S1P61966 158 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 POLR2LP62875 67 aaKnown RBP16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 SPA17Q15506 151 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 ZNF542PQ5EBM4 170 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 MARC1Q5VT66 337 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 AFMIDQ63HM1 303 aa16.92■□□□□ 0.3
TSPAN9-204ENST00000444315 SARM1Q6SZW1 724 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms