RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 KITP10721 976 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 RHOQP17081 205 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 NMBRP28336 390 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 KCNQ1P51787 676 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 ALDH18A1P54886 795 aaKnown RBP14.31□□□□□ -0.12
LIMD1-202ENST00000440097 MED21Q13503 144 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 SEPT6Q14141 434 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 LPCAT4Q643R3 524 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 TMEM135Q86UB9 458 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 IGSF8Q969P0 613 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 IL12RB2Q99665 862 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 IARS2Q9NSE4 1012 aaKnown RBP14.31□□□□□ -0.12
LIMD1-202ENST00000440097 MARCOQ9UEW3 520 aaPredicted RBP14.31□□□□□ -0.12
LIMD1-202ENST00000440097 MAGEB16A2A368 324 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 FKBP6O75344 327 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 CSPG5O95196 566 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 GEMP55040 296 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 MARC1Q5VT66 337 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 C16orf46Q6P387 395 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 CFAP52Q8N1V2 620 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 PSMG2Q969U7 264 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 FCRL5Q96RD9 977 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 CPNE1Q99829 537 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 S100A14Q9HCY8 104 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 IL37Q9NZH6 218 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 ZCWPW2A0A1B0GU75 182 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 FAM92AA1XBS5 289 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 AP3B1O00203 1094 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 RAMP2O60895 175 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 DNAJB2P25686 324 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 RENBPP51606 427 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 BST1Q10588 318 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 MSLNQ13421 630 aaPredicted RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 POLD3Q15054 466 aaPredicted RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 CHI3L2Q15782 390 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 PPM1JQ5JR12 505 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 CES4AQ5XG92 561 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 RNF111Q6ZNA4 994 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 ANKRD33Q7Z3H0 272 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 CMC1Q7Z7K0 106 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 DHDDSQ86SQ9 333 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 CRIPAKQ8N1N5 446 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 DPF3Q92784 378 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 TMEM169Q96HH4 297 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 MPP4Q96JB8 637 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 CYP4F11Q9HBI6 524 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 DNAAF2Q9NVR5 837 aaKnown RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 ZDHHC7Q9NXF8 308 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 PRR5-ARHGAP8B1AHC4 643 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 CXCL10P02778 98 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 ASLP04424 464 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 UQCRBP14927 111 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 SPRP35270 261 aaPredicted RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 ATP5C1P36542 298 aaKnown RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 TUFMP49411 452 aaKnown RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 AQP5P55064 265 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 AQP4P55087 323 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 ARHGAP8P85298 464 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 NAB1Q13506 487 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 UBAP2LQ14157 1087 aaKnown RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 DIS3LQ8TF46 1054 aaKnown RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 C2orf15Q8WU43 125 aaKnown RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 CCDC106Q9BWC9 280 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 NOL6Q9H6R4 1146 aaKnown RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 PRDM5Q9NQX1 630 aaPredicted RBP14.3□□□□□ -0.12
LIMD1-202ENST00000440097 SOX13Q9UN79 622 aa14.3□□□□□ -0.12
LIMD1-202ENST00000440097 A0A088AWK7 358 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 KLF11O14901 512 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 HNRNPRO43390 633 aaKnown RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 TBC1D4O60343 1298 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 CRHR1P34998 444 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 CHRNA4P43681 627 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 NDST2P52849 883 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 NRG1Q02297 640 aaPredicted RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 SLC10A7Q0GE19 358 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 ASPHQ12797 758 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 DLG1Q12959 904 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 MPP3Q13368 585 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 PDE1CQ14123 709 aaPredicted RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 MAP7Q14244 749 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 GRTP1Q5TC63 336 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 KYAT3Q6YP21 454 aaKnown RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 LRRC49Q8IUZ0 686 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 LGI2Q8N0V4 545 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 UMODL1-AS1Q8N2C9 162 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 PPHLN1Q8NEY8 458 aaKnown RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 E2F7Q96AV8 911 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 IGSF21Q96ID5 467 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 WWP1Q9H0M0 922 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 TMEM248Q9NWD8 314 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 CHD7Q9P2D1 2997 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 TTC24A2A3L6 582 aaPredicted RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 F5H5T6 163 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 PARNO95453 639 aaKnown RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 HARS2P49590 506 aaKnown RBP14.29□□□□□ -0.12
LIMD1-202ENST00000440097 GRM2Q14416 872 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms