RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 BUB1BO60566 1050 aaPredicted RBP23.91■■□□□ 1.42
VARS-217ENST00000440048 CEACAM1P13688 526 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 TIMP2P16035 220 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 KDELR1P24390 212 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 NSUN2Q08J23 767 aaKnown RBP eCLIP23.91■■□□□ 1.42
VARS-217ENST00000440048 STAT4Q14765 748 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 LRRC73Q5JTD7 316 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 TMTC1Q8IUR5 882 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 TMEM145Q8NBT3 493 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 PSKH2Q96QS6 385 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 MYOCQ99972 504 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 SLC32A1Q9H598 525 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 SUV39H2Q9H5I1 410 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 TFR2Q9UP52 801 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 EPN1Q9Y6I3 576 aaPredicted RBP23.91■■□□□ 1.42
VARS-217ENST00000440048 NEMP1O14524 444 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 AREL1O15033 823 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 SH3BP5O60239 455 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 SLC1A1P43005 524 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 NOP2P46087 812 aaKnown RBP23.9■■□□□ 1.42
VARS-217ENST00000440048 HADHBP55084 474 aaKnown RBP23.9■■□□□ 1.42
VARS-217ENST00000440048 FGL2Q14314 439 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 N4BP2L1Q5TBK1 243 aaPredicted RBP23.9■■□□□ 1.42
VARS-217ENST00000440048 IQCHQ86VS3 1027 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 PQLC3Q8N755 202 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 HCAR2Q8TDS4 363 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 ZNF641Q96N77 438 aaPredicted RBP23.9■■□□□ 1.42
VARS-217ENST00000440048 TUBGCP5Q96RT8 1024 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 SLC17A9Q9BYT1 436 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 FZD3Q9NPG1 666 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 HYOU1Q9Y4L1 999 aa23.9■■□□□ 1.42
VARS-217ENST00000440048 TSPAN11A1L157 253 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 LRRD1A4D1F6 860 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 NDUFA10O95299 355 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 ITIH2P19823 946 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 COMTP21964 271 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 HNRNPA2B1P22626 353 aaKnown RBP23.89■■□□□ 1.41
VARS-217ENST00000440048 AKT2P31751 481 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 RENBPP51606 427 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 NXPH1P58417 271 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 GALNT2Q10471 571 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 ZNF235Q14590 738 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 PRAMEF14Q5SWL7 426 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 LRRC38Q5VT99 294 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 CAMK1DQ8IU85 385 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 LRRC49Q8IUZ0 686 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 CAMK1GQ96NX5 476 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 ANP32EQ9BTT0 268 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 ATP13A3Q9H7F0 1226 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 LUC7LQ9NQ29 371 aaKnown RBP23.89■■□□□ 1.41
VARS-217ENST00000440048 GDF3Q9NR23 364 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 PCDHGB2Q9Y5G2 931 aa23.89■■□□□ 1.41
VARS-217ENST00000440048 IGLON5A6NGN9 336 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 DFNA5O60443 496 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 PAK4O96013 591 aaPredicted RBP23.88■■□□□ 1.41
VARS-217ENST00000440048 CDC25BP30305 580 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 SCNN1BP51168 640 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 OVGP1Q12889 678 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 ZSCAN30Q86W11 494 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 SPATS2Q86XZ4 545 aaKnown RBP23.88■■□□□ 1.41
VARS-217ENST00000440048 NAXDQ8IW45 347 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 PGBD5Q8N414 524 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 NSMCE3Q96MG7 304 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 RNF157Q96PX1 679 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 ELF4Q99607 663 aaPredicted RBP23.88■■□□□ 1.41
VARS-217ENST00000440048 C1QTNF2Q9BXJ5 285 aa23.88■■□□□ 1.41
VARS-217ENST00000440048 A0A0A6YYK5 440 aaPredicted RBP23.87■■□□□ 1.41
VARS-217ENST00000440048 A0A1B0GTQ1 180 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 TTC24A2A3L6 582 aaPredicted RBP23.87■■□□□ 1.41
VARS-217ENST00000440048 C3orf70A6NLC5 250 aaPredicted RBP23.87■■□□□ 1.41
VARS-217ENST00000440048 ZNF487B1APH4 448 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 SPOPO43791 374 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 MAP3K6O95382 1288 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 TNNT1P13805 278 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 XPAP23025 273 aaPredicted RBP23.87■■□□□ 1.41
VARS-217ENST00000440048 SERPINA4P29622 427 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 HSPA9P38646 679 aaKnown RBP23.87■■□□□ 1.41
VARS-217ENST00000440048 GARSP41250 739 aaKnown RBP23.87■■□□□ 1.41
VARS-217ENST00000440048 CCT8P50990 548 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 SUOXP51687 545 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 GBE1Q04446 702 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 CFAP58Q5T655 872 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 BRAT1Q6PJG6 821 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 RAD9BQ6WBX8 426 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 DBX2Q6ZNG2 339 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 ZSWIM9Q86XI8 627 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 RHOT1Q8IXI2 618 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 NSMCE1Q8WV22 266 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 KLHDC7BQ96G42 594 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 LRRK1Q38SD2 2015 aa23.87■■□□□ 1.41
VARS-217ENST00000440048 RAD51BO15315 384 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 MAGEC1O60732 1142 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 KRT1P04264 644 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 CR2P20023 1033 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 CLDN2P57739 230 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 AP1S1P61966 158 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 IL9RQ01113 521 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 BCL2L1Q07817 233 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 SGCGQ13326 291 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 UGP2Q16851 508 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms