RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 C12orf43Q96C57 262 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 B3GALT6Q96L58 329 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 SNX27Q96L92 541 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 GPAMQ9HCL2 828 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 VTA1Q9NP79 307 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 PRDM8Q9NQV8 689 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 BCAP29Q9UHQ4 241 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZDHHC2Q9UIJ5 367 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 MYRFQ9Y2G1 1151 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 COMMD10Q9Y6G5 202 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 TNPO2O14787 897 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 PIRTP0C851 137 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 MTHFD1P11586 935 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC7A2P52569 658 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 DNASE1L3Q13609 305 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 CSHL1Q14406 222 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 IMPG1Q17R60 797 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 GPRIN1Q7Z2K8 1008 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 DDIASQ8IXT1 998 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 DDHD1Q8NEL9 900 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 ACTRT2Q8TDY3 377 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 SORT1Q99523 831 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 ING2Q9H160 280 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF510Q9Y2H8 683 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 PCDHA11Q9Y5I1 949 aa10.04□□□□□ -0.8
CDC42SE1-202ENST00000439374 C9IYK1 514 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 F8W810 466 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 MDM4O15151 490 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 INPP4BO15327 924 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 C2P06681 752 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 AOC1P19801 751 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 RCVRNP35243 200 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 GJA9P57773 515 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 DGCR6Q14129 220 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CCDC81Q6ZN84 652 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 BNIPLQ7Z465 357 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CANT1Q8WVQ1 401 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 JADE3Q92613 823 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 HPS1Q92902 700 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 FRMD8P1Q9BZ68 369 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CDYLQ9Y232 598 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 COQ6Q9Y2Z9 468 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 DNAJC25-GNG10A0A024R161 153 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 TMEM247A6NEH6 219 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 YWHAQP27348 245 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CRHR1P34998 444 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CHRNA4P43681 627 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 PSEN2P49810 448 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 TBCELQ5QJ74 424 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 ARHGAP36Q6ZRI8 547 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 C14orf80Q86SX3 495 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 DNAJB14Q8TBM8 379 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 WNT8BQ93098 351 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 PCED1BQ96HM7 432 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 MRPS26Q9BYN8 205 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 NMRAL1Q9HBL8 299 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 LTB4R2Q9NPC1 389 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 DAPK2Q9UIK4 370 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CDY2AQ9Y6F7 541 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CDY1Q9Y6F8 540 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 C17orf102A2RUQ5 167 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 E7ESA3 106 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF23P17027 643 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 VARSP26640 1264 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 PSME3P61289 254 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 BTBD8Q5XKL5 378 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 FSTL4Q6MZW2 842 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 AAGABQ6PD74 315 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC26A9Q7LBE3 791 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 PIWIL3Q7Z3Z3 882 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 SETD3Q86TU7 594 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 C2orf69Q8N8R5 385 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 OR10Q1Q8NGQ4 319 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 KBTBD7Q8WVZ9 684 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 ELMO2Q96JJ3 720 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 FICDQ9BVA6 458 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 NDEL1Q9GZM8 345 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 CDH19Q9H159 772 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 PPCSQ9HAB8 311 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 XPR1Q9UBH6 696 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF229Q9UJW7 825 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 ST3GAL5Q9UNP4 418 aa10.03□□□□□ -0.8
CDC42SE1-202ENST00000439374 RRN3P2A6NIE6 340 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 TRIM13O60858 407 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 ESRRBO95718 433 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 THP07101 528 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 FAM163BP0C2L3 166 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 TFEBP19484 476 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 ADRA1BP35368 520 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 ACADSBP45954 432 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 GABRB2P47870 512 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF157P51786 506 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 INCA1Q0VD86 236 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC25A52Q3SY17 297 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 MGAT5BQ3V5L5 792 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 C16orf89Q6UX73 402 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 KBTBD6Q86V97 674 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms