RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SIGIRRQ6IA17 410 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 ANKRD26P1Q6NSI1 321 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 TUBA3EQ6PEY2 450 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 KDELC2Q7Z4H8 507 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 HTR3CQ8WXA8 447 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 GLMNQ92990 594 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 RNASEH2AO75792 299 aaKnown RBP15.94■□□□□ 0.14
DHFR-201ENST00000439211 GOT1P17174 413 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 SOX11P35716 441 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 GHRHRQ02643 423 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 PLCL1Q15111 1095 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 CMC1Q7Z7K0 106 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 RTKNQ9BST9 563 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 TCF7L2Q9NQB0 619 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 UBP1Q9NZI7 540 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 TEKT2Q9UIF3 430 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 TIPRLO75663 272 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 PARNO95453 639 aaKnown RBP15.94■□□□□ 0.14
DHFR-201ENST00000439211 APOA1P02647 267 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 POLBP06746 335 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 TSHRP16473 764 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 ARF4P18085 180 aaPredicted RBP15.94■□□□□ 0.14
DHFR-201ENST00000439211 HPCAL1P37235 193 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 TWF2Q6IBS0 349 aaKnown RBP15.94■□□□□ 0.14
DHFR-201ENST00000439211 GALNT6Q8NCL4 622 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 BEST2Q8NFU1 509 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 NDRG1Q92597 394 aaKnown RBP15.94■□□□□ 0.14
DHFR-201ENST00000439211 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 MCRS1Q96EZ8 462 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 GPR20Q99678 358 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 POPDC2Q9HBU9 364 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 SNTG2Q9NY99 539 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 PDZK1P1A8MUH7 402 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 SULT1C4O75897 302 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 GLRBP48167 497 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 CEP78Q5JTW2 689 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 PGM2L1Q6PCE3 622 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 SLCO6A1Q86UG4 719 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 RPRD1BQ9NQG5 326 aaKnown RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 CENPXA8MT69 81 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 CENPBD1B2RD01 187 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 SEMA3DO95025 777 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 ICAM3P32942 547 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 SLC18A2Q05940 514 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 VAC14Q08AM6 782 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 DPYSQ14117 519 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 PRPSAP1Q14558 356 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 PYROXD2Q8N2H3 581 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 ADAM32Q8TC27 787 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 CLEC4CQ8WTT0 213 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 SLC27A5Q9Y2P5 690 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 KIF13BQ9NQT8 1826 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 RNF103O00237 685 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 KRT6AP02538 564 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 KRT6BP04259 564 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 MSL3P1P0C860 447 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 CDH5P33151 784 aaPredicted RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 GMPRP36959 345 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 OPRL1P41146 370 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 VGLL4Q14135 290 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 POLD3Q15054 466 aaPredicted RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 STILQ15468 1287 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 CELF3Q5SZQ8 465 aaKnown RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 DSG4Q86SJ6 1040 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 LRRC49Q8IUZ0 686 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 HERC6Q8IVU3 1022 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 C10orf107Q8IVU9 208 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 ZNF420Q8TAQ5 688 aaPredicted RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 TRPM4Q8TD43 1214 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 HDAC2Q92769 488 aaKnown RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 MED30Q96HR3 178 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 MRPL45Q9BRJ2 306 aaKnown RBP15.93■□□□□ 0.14
DHFR-201ENST00000439211 ASB7Q9H672 318 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 FANCEQ9HB96 536 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 XPNPEP3Q9NQH7 507 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 CDY2AQ9Y6F7 541 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 CDY1Q9Y6F8 540 aa15.93■□□□□ 0.14
DHFR-201ENST00000439211 KLF11O14901 512 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 HSPA1AP0DMV8 641 aaKnown RBP15.92■□□□□ 0.14
DHFR-201ENST00000439211 HSPA1BP0DMV9 641 aaKnown RBP15.92■□□□□ 0.14
DHFR-201ENST00000439211 STMN1P16949 149 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 RPS3AP61247 264 aaKnown RBP15.92■□□□□ 0.14
DHFR-201ENST00000439211 GRM1Q13255 1194 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 TARBP2Q15633 366 aaKnown RBP15.92■□□□□ 0.14
DHFR-201ENST00000439211 EML3Q32P44 896 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 LILRA2Q8N149 483 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 CDK5RAP1Q96SZ6 601 aaKnown RBP15.92■□□□□ 0.14
DHFR-201ENST00000439211 ZNF717Q9BY31 904 aaPredicted RBP15.92■□□□□ 0.14
DHFR-201ENST00000439211 UCKL1Q9NWZ5 548 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 SLC39A10Q9ULF5 831 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 C7orf72A4D263 438 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 ITIH1P19827 911 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 ETV4P43268 484 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 SLC12A2P55011 1212 aa15.92■□□□□ 0.14
DHFR-201ENST00000439211 GEN1Q17RS7 908 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms