RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 KLHL11Q9NVR0 708 aa16.45■□□□□ 0.22
SMPD4-207ENST00000435455 DDX56Q9NY93 547 aaKnown RBP16.45■□□□□ 0.22
SMPD4-207ENST00000435455 EPN1Q9Y6I3 576 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-207ENST00000435455 LRRD1A4D1F6 860 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 SOWAHDA6NJG2 315 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 TLR4O00206 839 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 SLC31A1O15431 190 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 SPOPO43791 374 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 MFSD11O43934 449 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 WNT1P04628 370 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 CD59P13987 128 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 PRLRP16471 622 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 HNRNPA2B1P22626 353 aaKnown RBP16.44■□□□□ 0.22
SMPD4-207ENST00000435455 XPAP23025 273 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-207ENST00000435455 SERPINA4P29622 427 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 ABL2P42684 1182 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 RGRP47804 291 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 NOVA1P51513 510 aaKnown RBP16.44■□□□□ 0.22
SMPD4-207ENST00000435455 AP1S1P61966 158 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 ZNF423Q2M1K9 1284 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 CFAP58Q5T655 872 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 SEL1L3Q68CR1 1132 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 NCBP2-AS2Q69YL0 99 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 RHOT1Q8IXI2 618 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 RAPGEF5Q92565 580 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 KLK6Q92876 244 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 SLC17A9Q9BYT1 436 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 IL21RQ9HBE5 538 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 GDF3Q9NR23 364 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 TM7SF3Q9NS93 570 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 FNDC3AQ9Y2H6 1198 aaKnown RBP16.44■□□□□ 0.22
SMPD4-207ENST00000435455 PCDHGB2Q9Y5G2 931 aa16.44■□□□□ 0.22
SMPD4-207ENST00000435455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-207ENST00000435455 TSPAN11A1L157 253 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 GOLGA6L6A8MZA4 724 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 WNT9AO14904 365 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 AREL1O15033 823 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 PIGNO95427 931 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 PEX11BO96011 259 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 TIMP2P16035 220 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 GARSP41250 739 aaKnown RBP16.43■□□□□ 0.22
SMPD4-207ENST00000435455 CCT8P50990 548 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 BCL2L1Q07817 233 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 SLC10A7Q0GE19 358 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 ELP6Q0PNE2 266 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 GALNT2Q10471 571 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 SGCGQ13326 291 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 HNRNPDQ14103 355 aaKnown RBP16.43■□□□□ 0.22
SMPD4-207ENST00000435455 SUZ12Q15022 739 aaKnown RBP16.43■□□□□ 0.22
SMPD4-207ENST00000435455 IFI16Q16666 785 aaKnown RBP16.43■□□□□ 0.22
SMPD4-207ENST00000435455 MARC1Q5VT66 337 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 PSAPL1Q6NUJ1 521 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 TMEM145Q8NBT3 493 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 FAM174AQ8TBP5 190 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 ASB12Q8WXK4 309 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 CALR3Q96L12 384 aaKnown RBP16.43■□□□□ 0.22
SMPD4-207ENST00000435455 RNF157Q96PX1 679 aa16.43■□□□□ 0.22
SMPD4-207ENST00000435455 H0Y8X5 98 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 YKT6O15498 198 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 SPINT1O43278 529 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 BUB1BO60566 1050 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-207ENST00000435455 KRT1P04264 644 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 MX2P20592 715 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 COMTP21964 271 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 SCNN1BP51168 640 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 NXPH1P58417 271 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 TIGD7Q6NT04 549 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-207ENST00000435455 C11orf63Q6NUN7 778 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 CAMK1DQ8IU85 385 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 OXR1Q8N573 874 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 PQLC3Q8N755 202 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 PAF1Q8N7H5 531 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 DEFB124Q8NES8 71 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-207ENST00000435455 CXorf40AQ8TE69 158 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 FATE1Q969F0 183 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 KLHDC7BQ96G42 594 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 ZNF830Q96NB3 372 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-207ENST00000435455 TSGA13Q96PP4 275 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 ELF4Q99607 663 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-207ENST00000435455 BAG1Q99933 345 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-207ENST00000435455 C1QTNF2Q9BXJ5 285 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 ERVMER34-1Q9H9K5 563 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 HAUS2Q9NVX0 235 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 ITM2BQ9Y287 266 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 ALG6Q9Y672 507 aa16.42■□□□□ 0.22
SMPD4-207ENST00000435455 MED19A0JLT2 244 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-207ENST00000435455 IGLON5A6NGN9 336 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 C3orf70A6NLC5 250 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-207ENST00000435455 MUSKO15146 869 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 PSTPIP1O43586 416 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 SH3BP5O60239 455 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 TNNT1P13805 278 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 ZFXP17010 805 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-207ENST00000435455 CCNCP24863 283 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 MMP13P45452 471 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 POLR2LP62875 67 aaKnown RBP16.41■□□□□ 0.22
SMPD4-207ENST00000435455 UGP2Q16851 508 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 RALGPS1Q5JS13 557 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms