RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GJB7Q6PEY0 223 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 SYT13Q7L8C5 426 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 SATL1Q86VE3 508 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 DENND6AQ8IWF6 608 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 LNX1Q8TBB1 728 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-205ENST00000433888 ARRDC2Q8TBH0 407 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 USP13Q92995 863 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-205ENST00000433888 KTI12Q96EK9 354 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-205ENST00000433888 YME1L1Q96TA2 773 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 WDR12Q9GZL7 423 aaKnown RBP3.81□□□□□ -1.8
PTPN4-205ENST00000433888 GFRA4Q9GZZ7 299 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 GEMIN8Q9NWZ8 242 aaKnown RBP3.81□□□□□ -1.8
PTPN4-205ENST00000433888 ANKRD10Q9NXR5 420 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 ZNF711Q9Y462 761 aa3.81□□□□□ -1.8
PTPN4-205ENST00000433888 hDV102S1A0JD36 115 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 ZNF587BE7ETH6 402 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 WNT9BO14905 357 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 HSPA12AO43301 675 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 ZG16O60844 167 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 CAND2O75155 1236 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 SKAP2O75563 359 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-205ENST00000433888 SERPINC1P01008 464 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 DHRS4L1P0CG22 281 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 TIMP3P35625 211 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 NLRP5P59047 1200 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 PHEXP78562 749 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 ZNF155Q12901 538 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-205ENST00000433888 FCN2Q15485 313 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 RUNDC3AQ59EK9 446 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 SH2D4BQ5SQS7 431 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 SULT6B1Q6IMI4 303 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 TRMT1LQ7Z2T5 733 aaKnown RBP3.8□□□□□ -1.8
PTPN4-205ENST00000433888 CCDC105Q8IYK2 499 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 ATG16L2Q8NAA4 619 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 KBTBD3Q8NAB2 608 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 SPATA22Q8NHS9 363 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 RNF183Q96D59 192 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 FEM1CQ96JP0 617 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 DUX3Q96PT4 197 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 OR1F2PQ96R84 312 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 G6PC2Q9NQR9 355 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 ZFP57Q9NU63 452 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 SLCO3A1Q9UIG8 710 aa3.8□□□□□ -1.8
PTPN4-205ENST00000433888 CGNL1Q0VF96 1302 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 E7EVH7 732 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 ACKR2O00590 384 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 ADAP00813 363 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 APOHP02749 345 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-205ENST00000433888 AMBPP02760 352 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 CHAF1AQ13111 956 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-205ENST00000433888 PUM3Q15397 648 aaKnown RBP3.79□□□□□ -1.8
PTPN4-205ENST00000433888 OASLQ15646 514 aaKnown RBP3.79□□□□□ -1.8
PTPN4-205ENST00000433888 ACCSLQ4AC99 568 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 C14orf177Q52M58 125 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 NAPEPLDQ6IQ20 393 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 SFTPA2Q8IWL1 248 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 LRRC8CQ8TDW0 803 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 MTBPQ96DY7 904 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 ELAC2Q9BQ52 826 aaKnown RBP3.79□□□□□ -1.8
PTPN4-205ENST00000433888 MMTAG2Q9BU76 263 aaKnown RBP3.79□□□□□ -1.8
PTPN4-205ENST00000433888 PTPRHQ9HD43 1115 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 SCRT2Q9NQ03 307 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 ZNF224Q9NZL3 707 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 SLC9A2Q9UBY0 812 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 PAM16Q9Y3D7 125 aa3.79□□□□□ -1.8
PTPN4-205ENST00000433888 ERI2A8K979 691 aaKnown RBP3.78□□□□□ -1.8
PTPN4-205ENST00000433888 MID1O15344 667 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 SEPT4O43236 478 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 SLC25A17O43808 307 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 MYL1P05976 194 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 CDKN1AP38936 164 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 FUT6P51993 359 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 ARSFP54793 590 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 ZNF484Q5JVG2 852 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 PLA2G4FQ68DD2 849 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 PLEKHA7Q6IQ23 1121 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 KRTAP7-1Q8IUC3 87 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 WDSUB1Q8N9V3 476 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 OR6Y1Q8NGX8 325 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 TMEM170AQ8WVE7 144 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 FIG4Q92562 907 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 FBXO17Q96EF6 278 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 MASTLQ96GX5 879 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 RMDN3Q96TC7 470 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 CSF3RQ99062 836 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 CTDSP1Q9GZU7 261 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 LRRC4Q9HBW1 653 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 FBRSL1Q9HCM7 1045 aaKnown RBP3.78□□□□□ -1.8
PTPN4-205ENST00000433888 NOX4Q9NPH5 578 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 DACT1Q9NYF0 836 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 SIX4Q9UIU6 781 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 CD207Q9UJ71 328 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 SNX9Q9Y5X1 595 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 SMCHD1A6NHR9 2005 aa3.78□□□□□ -1.8
PTPN4-205ENST00000433888 HMGB1P09429 215 aaKnown RBP3.77□□□□□ -1.81
PTPN4-205ENST00000433888 FGF5P12034 268 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 KCNA5P22460 613 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 MARK3P27448 753 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 SERPINB3P29508 390 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms