RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	RYBP	Q8N488	228 aa	Predicted RBP	17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	DCBLD1	Q8N8Z6	715 aa		17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	ASB12	Q8WXK4	309 aa		17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	IFT43	Q96FT9	208 aa		17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	LENG8	Q96PV6	779 aa	Predicted RBP	17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	KLF6	Q99612	283 aa	Predicted RBP	17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	C1QTNF2	Q9BXJ5	285 aa		17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	LRRC19	Q9H756	370 aa		17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738	AP4E1	Q9UPM8	1137 aa		17.98	■□□□□ 0.47
MRPL28-203	ENST00000429738		A6NNZ2	444 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	EIF3CL	B5ME19	914 aa	Known RBP	17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	KRIT1	O00522	736 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	AREL1	O15033	823 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	RAD51B	O15315	384 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	SDC3	O75056	442 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	PAK4	O96013	591 aa	Predicted RBP	17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	PSMA2	P25787	234 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	TPI1	P60174	286 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	INSM1	Q01101	510 aa	Predicted RBP	17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	CCDC173	Q0VFZ6	552 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	CA9	Q16790	459 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	PROX2	Q3B8N5	592 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	DCP2	Q8IU60	420 aa	Known RBP	17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	GDAP1L1	Q96MZ0	367 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	KLHL32	Q96NJ5	620 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	PEBP4	Q96S96	227 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	EIF3C	Q99613	913 aa	Known RBP	17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	CALN1	Q9BXU9	219 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	PDF	Q9HBH1	243 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	LHX3	Q9UBR4	397 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	GGT7	Q9UJ14	662 aa		17.97	■□□□□ 0.47
MRPL28-203	ENST00000429738	POM121B	A6NF01	834 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	CAPN8	A6NHC0	703 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	IGSF6	O95976	241 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	FTL	P02792	175 aa	Predicted RBP	17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	GIMD1	P0DJR0	217 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	DGKA	P23743	735 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	PBX1	P40424	430 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	NDST2	P52849	883 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	KLHL30	Q0D2K2	578 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	MAPK8IP2	Q13387	824 aa	Predicted RBP	17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	ZNF211	Q13398	564 aa	Predicted RBP	17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	KLHL40	Q2TBA0	621 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	ERMARD	Q5T6L9	678 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	PCSK4	Q6UW60	755 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	GDPD4	Q6W3E5	623 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738		Q6ZSR6	202 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	ZNF354C	Q86Y25	554 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	SPACA3	Q8IXA5	215 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	ARHGEF26	Q96DR7	871 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	SNRNP25	Q9BV90	132 aa	Known RBP	17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	TRIM7	Q9C029	511 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	GPATCH2L	Q9NWQ4	482 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	DONSON	Q9NYP3	566 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	DKK3	Q9UBP4	350 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	ITM2B	Q9Y287	266 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	LRRK1	Q38SD2	2015 aa		17.96	■□□□□ 0.47
MRPL28-203	ENST00000429738	IGLON5	A6NGN9	336 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	TRIM38	O00635	465 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	SIGLEC6	O43699	453 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	PIAS2	O75928	621 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	MT-CO3	P00414	261 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	SERPINC1	P01008	464 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	RHOA	P61586	193 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	CXADR	P78310	365 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	CFHR1	Q03591	330 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	RAD51	Q06609	339 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	CYTH1	Q15438	398 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	PSTK	Q8IV42	348 aa	Known RBP	17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	NETO2	Q8NC67	525 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	DENND6B	Q8NEG7	585 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	OR4C6	Q8NH72	309 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	KCTD15	Q96SI1	283 aa	Predicted RBP	17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	CPEB1	Q9BZB8	566 aa	Known RBP	17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	ISCU	Q9H1K1	167 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	CAAP1	Q9H8G2	361 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	UCKL1	Q9NWZ5	548 aa		17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	CNOT8	Q9UFF9	292 aa	Known RBP	17.95	■□□□□ 0.46
MRPL28-203	ENST00000429738	ANKRD36	A6QL64	1941 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	SYCE3	A1L190	88 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	PRAMEF11	O60813	436 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	LRCH4	O75427	683 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	SKIL	P12757	684 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	MIP	P30301	263 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	RABIF	P47224	123 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	FZD2	Q14332	565 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	AFMID	Q63HM1	303 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	HGSNAT	Q68CP4	663 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	KDM7A	Q6ZMT4	941 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	PTAR1	Q7Z6K3	402 aa	Predicted RBP	17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	DHX35	Q9H5Z1	703 aa	Known RBP	17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	CBX8	Q9HC52	389 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	UBA2	Q9UBT2	640 aa	Predicted RBP	17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	PCSK1N	Q9UHG2	260 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	SCIN	Q9Y6U3	715 aa		17.94	■□□□□ 0.46
MRPL28-203	ENST00000429738	SPTY2D1-AS1	A0A0U1RR47	76 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738		A0A1W2PQJ5	194 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738		J3KR12	359 aa		17.93	■□□□□ 0.46
MRPL28-203	ENST00000429738	EEF2K	O00418	725 aa	Known RBP	17.93	■□□□□ 0.46

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms