RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 KIF26BQ2KJY2 2108 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 A0A1W2PNU3 283 aaPredicted RBP15.71■□□□□ 0.11
SEC13-210ENST00000428626 J3KR12 359 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 ATMINO43313 823 aaPredicted RBP15.71■□□□□ 0.11
SEC13-210ENST00000428626 PIGNO95427 931 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 JUNDP17535 347 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 RHOAP61586 193 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 C1orf61Q13536 156 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 DEFB133Q30KQ1 61 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 INO80DQ53TQ3 878 aaPredicted RBP15.71■□□□□ 0.11
SEC13-210ENST00000428626 E4F1Q66K89 784 aaPredicted RBP15.71■□□□□ 0.11
SEC13-210ENST00000428626 ACAD10Q6JQN1 1059 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 GUSBP11Q6P575 273 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 SASS6Q6UVJ0 657 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 TP53I13Q8NBR0 393 aaPredicted RBP15.71■□□□□ 0.11
SEC13-210ENST00000428626 LMX1AQ8TE12 382 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 PEBP4Q96S96 227 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 WRAP53Q9BUR4 548 aaKnown RBP15.71■□□□□ 0.11
SEC13-210ENST00000428626 OSBPL1AQ9BXW6 950 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 TRIM7Q9C029 511 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 PRORYQ9H606 182 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 LRRC19Q9H756 370 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 PDFQ9HBH1 243 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 COQ6Q9Y2Z9 468 aa15.71■□□□□ 0.11
SEC13-210ENST00000428626 NEMP2A6NFY4 417 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 ZSCAN5CA6NGD5 496 aaPredicted RBP15.7■□□□□ 0.1
SEC13-210ENST00000428626 AQP9O43315 295 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 BUB1BO60566 1050 aaPredicted RBP15.7■□□□□ 0.1
SEC13-210ENST00000428626 IGSF6O95976 241 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 MPOP05164 745 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 CELA2BP08218 269 aaPredicted RBP15.7■□□□□ 0.1
SEC13-210ENST00000428626 ALPPL2P10696 532 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 TGM2P21980 687 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 RGRP47804 291 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 YBEYP58557 167 aaPredicted RBP15.7■□□□□ 0.1
SEC13-210ENST00000428626 MAMLD1Q13495 774 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 CDKN3Q16667 212 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 KLHL40Q2TBA0 621 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 HS1BP3Q53T59 392 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 CYP4V2Q6ZWL3 525 aaPredicted RBP15.7■□□□□ 0.1
SEC13-210ENST00000428626 ZSCAN30Q86W11 494 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 ZSWIM9Q86XI8 627 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 AOPEPQ8N6M6 819 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 IFI44Q8TCB0 444 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 FGF11Q92914 225 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 CELF6Q96J87 481 aaKnown RBP15.7■□□□□ 0.1
SEC13-210ENST00000428626 NSMCE3Q96MG7 304 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 EPAS1Q99814 870 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 DUSP23Q9BVJ7 150 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 CLPBQ9H078 707 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 DKK3Q9UBP4 350 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 IPO11Q9UI26 975 aaKnown RBP15.7■□□□□ 0.1
SEC13-210ENST00000428626 CSNK1G3Q9Y6M4 447 aa15.7■□□□□ 0.1
SEC13-210ENST00000428626 LRP4O75096 1905 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 TMCO5BA8MYB1 307 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 CSO75390 466 aaKnown RBP15.69■□□□□ 0.1
SEC13-210ENST00000428626 TM7SF2O76062 418 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 PRKCGP05129 697 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 GP1BAP07359 652 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 FERP16591 822 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 CDK11BP21127 795 aaKnown RBP15.69■□□□□ 0.1
SEC13-210ENST00000428626 IRF4Q15306 451 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 TBC1D25Q3MII6 688 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 PARP15Q460N3 678 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 TMEM52BQ4KMG9 183 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 PERM1Q5SV97 790 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 KCTD16Q68DU8 428 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 ZCCHC8Q6NZY4 707 aaKnown RBP15.69■□□□□ 0.1
SEC13-210ENST00000428626 CRTC1Q6UUV9 634 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 PHACTR4Q8IZ21 702 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 ANKRD20A12PQ8NF67 263 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 CASKIN2Q8WXE0 1202 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 LRRC61Q9BV99 259 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 CPEB1Q9BZB8 566 aaKnown RBP15.69■□□□□ 0.1
SEC13-210ENST00000428626 SLC39A8Q9C0K1 460 aa15.69■□□□□ 0.1
SEC13-210ENST00000428626 GCN1Q92616 2671 aaKnown RBP15.69■□□□□ 0.1
SEC13-210ENST00000428626 ANKRD36A6QL64 1941 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 KALRNO60229 2985 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 TSPAN11A1L157 253 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 CPED1A4D0V7 1026 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 PMS2P1A4D2B8 440 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 EME2A4GXA9 379 aaPredicted RBP15.68■□□□□ 0.1
SEC13-210ENST00000428626 H3BM21 787 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 TPI1P60174 286 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 TYRO3Q06418 890 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 CCDC173Q0VFZ6 552 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 ACAP1Q15027 740 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 WSCD2Q2TBF2 565 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 PRRT3Q5FWE3 981 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 PLEKHA7Q6IQ23 1121 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 DCUN1D2Q6PH85 259 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 ARHGAP36Q6ZRI8 547 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
SEC13-210ENST00000428626 ARHGAP12Q8IWW6 846 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 TP53INP2Q8IXH6 220 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 SLC35F3Q8IY50 421 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 MAPK15Q8TD08 544 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 CXorf40AQ8TE69 158 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 FUBP1Q96AE4 644 aaKnown RBP15.68■□□□□ 0.1
SEC13-210ENST00000428626 ARHGEF26Q96DR7 871 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms