RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 LRRC73Q5JTD7 316 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 Q6ZSR6 202 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 SRLQ86TD4 932 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 TMEM145Q8NBT3 493 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 KCTD6Q8NC69 237 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 TSEN2Q8NCE0 465 aaKnown RBP20.9■□□□□ 0.94
HSPG2-205ENST00000427897 OR13H1Q8NG92 308 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 SAP25Q8TEE9 199 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 ZNF641Q96N77 438 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-205ENST00000427897 CSPG4P5Q96PW8 444 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 PCDH18Q9HCL0 1135 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 DKK3Q9UBP4 350 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 PCNX2A6NKB5 2137 aa20.89■□□□□ 0.94
HSPG2-205ENST00000427897 AKR1B15C9JRZ8 316 aaPredicted RBP20.89■□□□□ 0.93
HSPG2-205ENST00000427897 TM7SF2O76062 418 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 ATXN1LP0C7T5 689 aaKnown RBP20.89■□□□□ 0.93
HSPG2-205ENST00000427897 EPHA8P29322 1005 aaPredicted RBP20.89■□□□□ 0.93
HSPG2-205ENST00000427897 SUOXP51687 545 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 ZNF235Q14590 738 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 LBRQ14739 615 aaKnown RBP20.89■□□□□ 0.93
HSPG2-205ENST00000427897 AFMIDQ63HM1 303 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 ERAP2Q6P179 960 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 CNGA4Q8IV77 575 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 MAP7D3Q8IWC1 876 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 ARHGAP12Q8IWW6 846 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 NPWQ8N729 165 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 HCAR2Q8TDS4 363 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 ADAMTS14Q8WXS8 1223 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 CNDP2Q96KP4 475 aaKnown RBP20.89■□□□□ 0.93
HSPG2-205ENST00000427897 TUBGCP5Q96RT8 1024 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 NHEJ1Q9H9Q4 299 aaPredicted RBP20.89■□□□□ 0.93
HSPG2-205ENST00000427897 SEPT3Q9UH03 358 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 NEUROG3Q9Y4Z2 214 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 DOCK9Q9BZ29 2069 aa20.89■□□□□ 0.93
HSPG2-205ENST00000427897 CNOT1A5YKK6 2376 aaKnown RBP20.88■□□□□ 0.93
HSPG2-205ENST00000427897 MMP20O60882 483 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 SDC3O75056 442 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 MFAP3LO75121 409 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 TIMP2P16035 220 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 CSNK1DP48730 415 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 SCNN1BP51168 640 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 SHBQ15464 509 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 ODF2Q5BJF6 829 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 TMCO4Q5TGY1 634 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 TXNRD3NBQ6F5E7 133 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 GCNT7Q6ZNI0 430 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 ARHGAP36Q6ZRI8 547 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 RAB44Q7Z6P3 723 aaPredicted RBP20.88■□□□□ 0.93
HSPG2-205ENST00000427897 SLCO6A1Q86UG4 719 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 GAS2L3Q86XJ1 694 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 ATPAF2Q8N5M1 289 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 BAHD1Q8TBE0 780 aaPredicted RBP20.88■□□□□ 0.93
HSPG2-205ENST00000427897 ZNF599Q96NL3 588 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 LENG8Q96PV6 779 aaPredicted RBP20.88■□□□□ 0.93
HSPG2-205ENST00000427897 CHP1Q99653 195 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 WRAP53Q9BUR4 548 aaKnown RBP20.88■□□□□ 0.93
HSPG2-205ENST00000427897 C1QTNF2Q9BXJ5 285 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 RBSNQ9H1K0 784 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 KLHL11Q9NVR0 708 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 GGT7Q9UJ14 662 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 KLK13Q9UKR3 277 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 SPTBN2O15020 2390 aa20.88■□□□□ 0.93
HSPG2-205ENST00000427897 ENC1O14682 589 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 PROSCO94903 275 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 KRT7P08729 469 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 TMEM253P0C7T8 217 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 RABIFP47224 123 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 POLR2LP62875 67 aaKnown RBP20.87■□□□□ 0.93
HSPG2-205ENST00000427897 SLC25A11Q02978 314 aaKnown RBP20.87■□□□□ 0.93
HSPG2-205ENST00000427897 NSUN2Q08J23 767 aaKnown RBP eCLIP20.87■□□□□ 0.93
HSPG2-205ENST00000427897 MESDQ14696 234 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 ST3GAL2Q16842 350 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 BRAT1Q6PJG6 821 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 UNQ6494/PRO21346Q6UXR6 183 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 ABI3BPQ7Z7G0 1075 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 CAMK1DQ8IU85 385 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 ASB12Q8WXK4 309 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 BMFQ96LC9 184 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 PACSIN1Q9BY11 444 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 DNAJC28Q9NX36 388 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 RCOR3Q9P2K3 495 aaPredicted RBP20.87■□□□□ 0.93
HSPG2-205ENST00000427897 MSRB2Q9Y3D2 182 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 TRPM6Q9BX84 2022 aa20.87■□□□□ 0.93
HSPG2-205ENST00000427897 POM121BA6NF01 834 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 H3BM21 787 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 NEBLO76041 1014 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 ITIH2P19823 946 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 THOP1P52888 689 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 FGL2Q14314 439 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 UGP2Q16851 508 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 SARM1Q6SZW1 724 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 KYAT3Q6YP21 454 aaKnown RBP20.86■□□□□ 0.93
HSPG2-205ENST00000427897 DENND6BQ8NEG7 585 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 SPTLC3Q9NUV7 552 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 ETNK2Q9NVF9 386 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 WASF3Q9UPY6 502 aa20.86■□□□□ 0.93
HSPG2-205ENST00000427897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.85■□□□□ 0.93
HSPG2-205ENST00000427897 AREL1O15033 823 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 RAD51BO15315 384 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 LZTS3O60299 673 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms