RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PNPLA1Q8N8W4 532 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 LPCAT1Q8NF37 534 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 THAP10Q9P2Z0 257 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 CCL22O00626 93 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 CCINQ13939 588 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 MYLK3Q32MK0 819 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 BBS9Q3SYG4 887 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 KCTD11Q693B1 232 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 ART4Q93070 314 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 SERPINB12Q96P63 405 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 WDR83Q9BRX9 315 aaKnown RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 C8orf33Q9H7E9 229 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 TRPV5Q9NQA5 729 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 FNDC3AQ9Y2H6 1198 aaKnown RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 DOCK9Q9BZ29 2069 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 IGSF6O95976 241 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 IL1BP01584 269 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 DCNP07585 359 aaKnown RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 SERPINF2P08697 491 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 GAS6Q14393 721 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 RFTN1Q14699 578 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 POU6F1Q14863 301 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 GPR161Q8N6U8 529 aaKnown RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 ZNF557Q8N988 423 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 SEC14L1Q92503 715 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 C9orf72Q96LT7 481 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 KLHL32Q96NJ5 620 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 NUDCD1Q96RS6 583 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 SHOC2Q9UQ13 582 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 WASF2Q9Y6W5 498 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 KPNA3O00505 521 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 AURKAO14965 403 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 AP2A1O95782 977 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 PRLP01236 227 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 MGAT1P26572 445 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 RECQLP46063 649 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 SNRPD1P62314 119 aaKnown RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 EIF4HQ15056 248 aaKnown RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 HNRNPA1L2Q32P51 320 aaKnown RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 SIRPB2Q5JXA9 342 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 PPP1R21Q6ZMI0 780 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 CCNI2Q6ZMN8 369 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 UCMAQ8WVF2 138 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 RMDN1Q96DB5 314 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 ZNF778Q96MU6 729 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 MKRN2Q9H000 416 aaKnown RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 LMAN1LQ9HAT1 526 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 PRSS16Q9NQE7 514 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 CACNA1IQ9P0X4 2223 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 FAM170BA6NMN3 283 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 FDFT1P37268 417 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 PXNP49023 591 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 PRPSAP1Q14558 356 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 TBL1YQ9BQ87 522 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 TDRD1Q9BXT4 1180 aaKnown RBP13.57□□□□□ -0.24
PRPF39-202ENST00000424478 WHRNQ9P202 907 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 ITM2BQ9Y287 266 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 KCTD3Q9Y597 815 aa13.57□□□□□ -0.24
PRPF39-202ENST00000424478 CUL9Q8IWT3 2517 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 ASLP04424 464 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 SRPRAP08240 638 aaKnown RBP13.56□□□□□ -0.24
PRPF39-202ENST00000424478 PSMD8P48556 350 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 GEMIN4P57678 1058 aaKnown RBP13.56□□□□□ -0.24
PRPF39-202ENST00000424478 DHX9Q08211 1270 aaKnown RBP13.56□□□□□ -0.24
PRPF39-202ENST00000424478 SLC20A2Q08357 652 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 DENND5AQ6IQ26 1287 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 PCDH20Q8N6Y1 951 aaKnown RBP13.56□□□□□ -0.24
PRPF39-202ENST00000424478 FATE1Q969F0 183 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 EXOC4Q96A65 974 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 IFT43Q96FT9 208 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 FAM129BQ96TA1 746 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 CHMP2BQ9UQN3 213 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 HOXB2P14652 356 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 ABL2P42684 1182 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 BCL2L1Q07817 233 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 PDIA2Q13087 525 aaKnown RBP13.56□□□□□ -0.24
PRPF39-202ENST00000424478 CASC4Q6P4E1 433 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 UNC5BQ8IZJ1 945 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 FMO2Q99518 471 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 TBC1D17Q9HA65 648 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 SAYSD1Q9NPB0 183 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 FAM114A2Q9NRY5 505 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 SYBUQ9NX95 663 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 GGT7Q9UJ14 662 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 SPO11Q9Y5K1 396 aa13.56□□□□□ -0.24
PRPF39-202ENST00000424478 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.56□□□□□ -0.24
PRPF39-202ENST00000424478 TARSL2A2RTX5 802 aaKnown RBP13.55□□□□□ -0.24
PRPF39-202ENST00000424478 ATXN1LP0C7T5 689 aaKnown RBP13.55□□□□□ -0.24
PRPF39-202ENST00000424478 CHRNB1P11230 501 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 CDK18Q07002 472 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 SEPT6Q14141 434 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 ZBED8Q8IZ13 594 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms