RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ARHGAP39Q9C0H5 1083 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 RHBGQ9H310 441 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 C12orf4Q9NQ89 552 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.96□□□□□ -1.94
PMS1-209ENST00000424059 THAP1Q9NVV9 213 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 SRP68Q9UHB9 627 aaKnown RBP2.96□□□□□ -1.94
PMS1-209ENST00000424059 MOSPD1Q9UJG1 213 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 PSME2Q9UL46 239 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 SLC39A10Q9ULF5 831 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 GAB2Q9UQC2 676 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 TRPV2Q9Y5S1 764 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 ACTL7AQ9Y615 435 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 PPIP5K1Q6PFW1 1433 aa2.96□□□□□ -1.94
PMS1-209ENST00000424059 MAP3K5Q99683 1374 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 PRAMEF33A0A0G2JMD5 474 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 DNAJC9-AS1A6NH13 148 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 NCF1BA6NI72 391 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 LRRC3CA6NJW4 275 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 NCF1CA8MVU1 366 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 E7ENX8 843 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 H0YIN7 160 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 K7ESF4 209 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 DDX39AO00148 427 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 NDUFS8O00217 210 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 WNT10BO00744 389 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 RAD51BO15315 384 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 PRAMEF10O60809 474 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ASNSP08243 561 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 SNRPAP09012 282 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 RARBP10826 455 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 GSPT1P15170 499 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 RXRAP19793 462 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 TKTP29401 623 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 SERPINB6P35237 376 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 KRT9P35527 623 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 TUBP50607 506 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 MTTPP55157 894 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 RPS7P62081 194 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 ABATP80404 500 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 S100A12P80511 92 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 DSC2Q02487 901 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 TAP2Q03519 686 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 GFPT1Q06210 699 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 STRN3Q13033 797 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 HERC3Q15034 1050 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 NFIL3Q16649 462 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 PPP6R3Q5H9R7 873 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 CLVS2Q5SYC1 327 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ZNF658Q5TYW1 1059 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 PGM2L1Q6PCE3 622 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 IL27RAQ6UWB1 636 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ARHGAP18Q8N392 663 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 SH2D3CQ8N5H7 860 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 CCNYL1Q8N7R7 359 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 DNAAF3Q8N9W5 541 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 POC1BQ8TC44 478 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 SLC26A7Q8TE54 656 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 DQX1Q8TE96 717 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 SCARB1Q8WTV0 552 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 IFT81Q8WYA0 676 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 RUBCNQ92622 972 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 KRT35Q92764 455 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 PTP4A1Q93096 173 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ZUFSPQ96AP4 578 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 MARS2Q96GW9 593 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 MSANTD3Q96H12 275 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 METTL2AQ96IZ6 378 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 CEP19Q96LK0 163 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ADAD1Q96M93 576 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 EYA3Q99504 573 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 PKP4Q99569 1192 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 HAUS8Q9BT25 410 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 TBCDQ9BTW9 1192 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 CARD6Q9BX69 1037 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 C11orf54Q9H0W9 315 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 AZI2Q9H6S1 392 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 LDAHQ9H6V9 325 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ATP13A3Q9H7F0 1226 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 SYNDIG1Q9H7V2 258 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 NEK6Q9HC98 313 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 MAN1C1Q9NR34 630 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 OLA1Q9NTK5 396 aaKnown RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 GDAP2Q9NXN4 497 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 UBA2Q9UBT2 640 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 IL19Q9UHD0 177 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 KIF7Q2M1P5 1343 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 COL3A1P02461 1466 aaPredicted RBP2.95□□□□□ -1.94
PMS1-209ENST00000424059 SBNO1A3KN83 1393 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ARHGEF37A1IGU5 675 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 A6NLC8 198 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 SNTNA6NMZ2 147 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 GOLGA8RI6L899 631 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 YY2O15391 372 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 TLR2O60603 784 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 CBR3O75828 277 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 ZFPL1O95159 310 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 PIGNO95427 931 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 CLPTM1O96005 669 aa2.95□□□□□ -1.94
PMS1-209ENST00000424059 GALTP07902 379 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms