RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ENO2P09104 434 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 MYBL2P10244 700 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 KCNE1P15382 129 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 REXO1L1PQ8IX06 675 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 RAVER1Q8IY67 606 aaKnown RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 COPS8Q99627 209 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 IL12RB2Q99665 862 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 VPS45Q9NRW7 570 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 ADAM21Q9UKJ8 722 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 YIPF1Q9Y548 306 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 C5orf60A6NFR6 353 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 MDM4O15151 490 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 USP1O94782 785 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CLK3P49761 638 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CDK18Q07002 472 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 HIBCHQ6NVY1 386 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 IFNEQ86WN2 208 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 AHI1Q8N157 1196 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ZCCHC9Q8N567 271 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 MAGED4Q96JG8 741 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 TNRC6CQ9HCJ0 1690 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CLEC4FQ8N1N0 589 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 BCO2Q9BYV7 579 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 IMP3Q9NV31 184 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 SOX13Q9UN79 622 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 PIPSLA2A3N6 862 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ISM1B1AKI9 464 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 INPP4BO15327 924 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ATG7O95352 703 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 COX7A2P14406 83 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ATP6V1C1P21283 382 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 TRPC1P48995 793 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ALG11Q2TAA5 492 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 PTPN20Q4JDL3 420 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 SLC26A9Q7LBE3 791 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 KREMEN1Q96MU8 473 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 C16orf70Q9BSU1 422 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 TNKS2Q9H2K2 1166 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 KLHL28Q9NXS3 571 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 IL36AQ9UHA7 158 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 TM7SF2O76062 418 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CYBAP13498 195 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ZC3H12BQ5HYM0 836 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ARHGAP17Q68EM7 881 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CNSTQ6PJW8 725 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 SERINC5Q86VE9 423 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CYP4X1Q8N118 509 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 OR2W6PQ8NHA6 318 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 DQX1Q8TE96 717 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ASZ1Q8WWH4 475 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 TMEM237Q96Q45 408 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 IFNA16P05015 189 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 FAM163BP0C2L3 166 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ZNHIT3Q15649 155 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 POTEHQ6S545 545 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 SLC22A17Q8WUG5 538 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 SCML2Q9UQR0 700 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 RAI2Q9Y5P3 530 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 MC4RP32245 332 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CLCN5P51795 746 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 SPIRE1Q08AE8 756 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ICE2Q659A1 982 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 FNDC5Q8NAU1 212 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 B4GALNT2Q8NHY0 566 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 ZNF461Q8TAF7 563 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 METTL6Q8TCB7 284 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 EPS8L3Q8TE67 593 aaKnown RBP10.82□□□□□ -0.68
PTCH1-206ENST00000421141 FBXL18Q96ME1 805 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 SLC38A3Q99624 504 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 HEPHQ9BQS7 1158 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 XPNPEP1Q9NQW7 623 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 HEBP2Q9Y5Z4 205 aa10.82□□□□□ -0.68
PTCH1-206ENST00000421141 CPSF4O95639 269 aaKnown RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 NUDT14O95848 222 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 RRM2P31350 389 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 SH2D3CQ8N5H7 860 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ALLCQ8N6M5 410 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 DIS3LQ8TF46 1054 aaKnown RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ANLNQ9NQW6 1124 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 VTI1BQ9UEU0 232 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 A0A096LPK6 155 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 SLC11A1P49279 550 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 CDK7P50613 346 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 MID1IP1Q9NPA3 183 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 CHKBQ9Y259 395 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 CFAP73A6NFT4 308 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 AKAP10O43572 662 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 FSBPO95073 299 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 PIGRP01833 764 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 NTSP30990 170 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 USP39Q53GS9 565 aaKnown RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 CRTC3Q6UUV7 619 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ADAMTSL2Q86TH1 951 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 CENPLQ8N0S6 344 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ZIM3Q96PE6 472 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 LGMNQ99538 433 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 TDP1Q9NUW8 608 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms