RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 AREL1O15033 823 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 APOC2P02655 101 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 SPEM2Q0P670 501 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 WDR45BQ5MNZ6 344 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 AADACL2Q6P093 401 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 NEK5Q6P3R8 708 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 ZSWIM9Q86XI8 627 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 RYBPQ8N488 228 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-204ENST00000418628 UBL4BQ8N7F7 174 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 OR14C36Q8NHC7 312 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 GANCQ8TET4 914 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 LRRN4Q8WUT4 740 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 RAB7BQ96AH8 199 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 KLHL32Q96NJ5 620 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 OSBPL8Q9BZF1 889 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 EBF2Q9HAK2 575 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 VPS45Q9NRW7 570 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 SEMA4GQ9NTN9 838 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 SAE1Q9UBE0 346 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-204ENST00000418628 ATP8A1Q9Y2Q0 1164 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 FADS3Q9Y5Q0 445 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 SLCO1B1Q9Y6L6 691 aa18.86■□□□□ 0.61
PTCD3-204ENST00000418628 ARID1BQ8NFD5 2236 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-204ENST00000418628 MEI4A8MW99 385 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 HTRA2O43464 458 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-204ENST00000418628 HLA-DQB2P05538 268 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 CCNB1P14635 433 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 CCDC15Q0P6D6 951 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 ZBTB17Q13105 803 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 KLF1Q13351 362 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-204ENST00000418628 IHHQ14623 411 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 NOMO1Q15155 1222 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 LLGL1Q15334 1064 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 TMEM259Q4ZIN3 620 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 MEI1Q5TIA1 1274 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 KAZNQ674X7 775 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 SLC23A3Q6PIS1 610 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 REXO1L1PQ8IX06 675 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 BBS5Q8N3I7 341 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 NSMCE1Q8WV22 266 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 SUV39H2Q9H5I1 410 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 ATP13A3Q9H7F0 1226 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 CAPN10Q9HC96 672 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 DYRK4Q9NR20 520 aa18.85■□□□□ 0.61
PTCD3-204ENST00000418628 CNOT1A5YKK6 2376 aaKnown RBP18.84■□□□□ 0.61
PTCD3-204ENST00000418628 A0A1W2PPC4 97 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 SOCS5O75159 536 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 CD27P26842 260 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 SCNN1BP51168 640 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 SUOXP51687 545 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 MAXP61244 160 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 SYCP2LQ5T4T6 812 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 BRAT1Q6PJG6 821 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 PRR23CQ6ZRP0 262 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 BZW1Q7L1Q6 419 aaKnown RBP18.84■□□□□ 0.61
PTCD3-204ENST00000418628 CAMK1DQ8IU85 385 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 GPR161Q8N6U8 529 aaKnown RBP18.84■□□□□ 0.61
PTCD3-204ENST00000418628 CNTD1Q8N815 330 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 TRIM58Q8NG06 486 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 ARRDC2Q8TBH0 407 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 PIGKQ92643 395 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.611e-11■■■■■ 28.1
PTCD3-204ENST00000418628 HEMGNQ9BXL5 484 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 POLR1EQ9GZS1 481 aaKnown RBP18.84■□□□□ 0.61
PTCD3-204ENST00000418628 NOD2Q9HC29 1040 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 NT5MQ9NPB1 228 aa18.84■□□□□ 0.61
PTCD3-204ENST00000418628 EIF2B4Q9UI10 523 aaKnown RBP18.84■□□□□ 0.61
PTCD3-204ENST00000418628 ZFR2Q9UPR6 939 aaKnown RBP18.84■□□□□ 0.61
PTCD3-204ENST00000418628 ZFC3H1O60293 1989 aaKnown RBP18.84■□□□□ 0.61
PTCD3-204ENST00000418628 PCNX2A6NKB5 2137 aa18.83■□□□□ 0.61
PTCD3-204ENST00000418628 DNAH14Q0VDD8 3507 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
PTCD3-204ENST00000418628 PATE3B3GLJ2 98 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 KCNK1O00180 336 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 TIMP2P16035 220 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 MAOBP27338 520 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 SERPINA4P29622 427 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 ZNF211Q13398 564 aaPredicted RBP18.83■□□□□ 0.6
PTCD3-204ENST00000418628 XRCC4Q13426 336 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 CCDC6Q16204 474 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 TCEAL6Q6IPX3 200 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 FBXL19Q6PCT2 694 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 RABEPKQ7Z6M1 372 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 ZSCAN30Q86W11 494 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 CCNYQ8ND76 341 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 P3H4Q92791 437 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 TCEAL3Q969E4 200 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 ALS2CR12Q96Q35 445 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 SMOC1Q9H4F8 434 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 RBM22Q9NW64 420 aaKnown RBP eCLIP18.83■□□□□ 0.6
PTCD3-204ENST00000418628 SUSD2Q9UGT4 822 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 GGT7Q9UJ14 662 aa18.83■□□□□ 0.6
PTCD3-204ENST00000418628 TTC24A2A3L6 582 aaPredicted RBP18.82■□□□□ 0.6
PTCD3-204ENST00000418628 UPK3BL1B0FP48 263 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 UPK3BL2E5RIL1 263 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 FZD6O60353 706 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 FOXD2O60548 495 aaPredicted RBP18.82■□□□□ 0.6
PTCD3-204ENST00000418628 FSBPO95073 299 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 SERPINF2P08697 491 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 NUDT1P36639 197 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms