RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MX2P20592 715 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 SSTR1P30872 391 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 CTHP32929 405 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 ETFBP38117 255 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 CSKP41240 450 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 GARSP41250 739 aaKnown RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 NRLP54845 237 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PDK1Q15118 436 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 ZKSCAN8Q15776 578 aaPredicted RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 GEN1Q17RS7 908 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 KLHL38Q2WGJ6 581 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 DARS2Q6PI48 645 aaKnown RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 TXNDC11Q6PKC3 985 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 ARHGAP36Q6ZRI8 547 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 SPATA21Q7Z572 469 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 ZC3H18Q86VM9 953 aaKnown RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 RALGPS2Q86X27 583 aaPredicted RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 CCDC117Q8IWD4 279 aaPredicted RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 GJD3Q8N144 294 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 TAB3Q8N5C8 712 aaPredicted RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 CCDC33Q8N5R6 958 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 FBXO36Q8NEA4 188 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 OR7D4Q8NG98 312 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 DENND1AQ8TEH3 1009 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 TTC17Q96AE7 1141 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 SMC6Q96SB8 1091 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 C8orf33Q9H7E9 229 aaPredicted RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 ABCF3Q9NUQ8 709 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 CXorf51AA0A1B0GTR3 108 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PRRT4C9JH25 899 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 DFFAO00273 331 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 KDELR3O43731 214 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 CD160O95971 181 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PEX11BO96011 259 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 HNRNPH1P31943 449 aaKnown RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 FOXN2P32314 431 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 GALK1P51570 392 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 ZNF33AQ06730 810 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PPIDQ08752 370 aaKnown RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 DMC1Q14565 340 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 KCNJ11Q14654 390 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 EFTUD2Q15029 972 aaKnown RBP eCLIP10.09□□□□□ -0.794e-8■■□□□ 13.2
DDB1-202ENST00000414411 BBS9Q3SYG4 887 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 FUT11Q495W5 492 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 SLC44A4Q53GD3 710 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PITRM1Q5JRX3 1037 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 CGB2Q6NT52 195 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 C3orf62Q6ZUJ4 267 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 C4orf33Q8N1A6 199 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 FATE1Q969F0 183 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 HDAC11Q96DB2 347 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 RTP4Q96DX8 246 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PAFAH2Q99487 392 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 LGMNQ99538 433 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 BRD8Q9H0E9 1235 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 MUC3BQ9H195 1237 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PDFQ9HBH1 243 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 SLC40A1Q9NP59 571 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 IPO11Q9UI26 975 aaKnown RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 PIAS3Q9Y6X2 628 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 ATG2BQ96BY7 2078 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 CFAP69A5D8W1 941 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 HACD1B0YJ81 288 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 H7C0C1 242 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 J3KR12 359 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 TYROBPO43914 113 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 PRAMEF11O60813 436 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 KAT7O95251 611 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 GLDCP23378 1020 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 CCNCP24863 283 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 ATP5OP48047 213 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 ARF5P84085 180 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 MTM1Q13496 603 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 SPARCL1Q14515 664 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 PRKD1Q15139 912 aaPredicted RBP10.08□□□□□ -0.8
DDB1-202ENST00000414411 GRAMD4Q6IC98 578 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 RGS9BPQ6ZS82 235 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 AHI1Q8N157 1196 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 TERB1Q8NA31 727 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 DCAF4L2Q8NA75 395 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 FBF1Q8TES7 1133 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 LRRN4Q8WUT4 740 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 EZH1Q92800 747 aaPredicted RBP10.08□□□□□ -0.8
DDB1-202ENST00000414411 ACDQ96AP0 544 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 GRAMD1AQ96CP6 724 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 P2RY13Q9BPV8 354 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 SPON2Q9BUD6 331 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 USP29Q9HBJ7 922 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 ATP13A1Q9HD20 1204 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 SSU72Q9NP77 194 aaKnown RBP10.08□□□□□ -0.8
DDB1-202ENST00000414411 WNT16Q9UBV4 365 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 VPS28Q9UK41 221 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 ARL2BPQ9Y2Y0 163 aa10.08□□□□□ -0.8
DDB1-202ENST00000414411 A0A1W2PPM1 405 aa10.07□□□□□ -0.8
DDB1-202ENST00000414411 BCLAF3A2AJT9 711 aaKnown RBP10.07□□□□□ -0.8
DDB1-202ENST00000414411 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.07□□□□□ -0.8
DDB1-202ENST00000414411 SNAP91O60641 907 aa10.07□□□□□ -0.8
DDB1-202ENST00000414411 CA4P22748 312 aa10.07□□□□□ -0.8
DDB1-202ENST00000414411 RPA3P35244 121 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms