RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RMDN1Q96DB5 314 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 TSGA13Q96PP4 275 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 BRD8Q9H0E9 1235 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 GRPEL1Q9HAV7 217 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 SCUBE2Q9NQ36 999 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 HYOU1Q9Y4L1 999 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 HEY1Q9Y5J3 304 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 FADS3Q9Y5Q0 445 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 CCDC66A2RUB6 948 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 VILLO15195 856 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 MATN3O15232 486 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 MFSD11O43934 449 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 NR2C2P49116 596 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 CSNK1EP49674 416 aaKnown RBP14.87□□□□□ -0.03
CHD1-202ENST00000414220 TAS2R38P59533 333 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 GRIK2Q13002 908 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 SUZ12Q15022 739 aaKnown RBP14.87□□□□□ -0.03
CHD1-202ENST00000414220 SLC9A4Q6AI14 798 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 TMEM139Q8IV31 216 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 TP53INP2Q8IXH6 220 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 CCDC13Q8IYE1 715 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 KATNAL2Q8IYT4 538 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 MINDY1Q8N5J2 469 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 PQLC3Q8N755 202 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 EXD1Q8NHP7 514 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 C1orf216Q8TAB5 229 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 FATE1Q969F0 183 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 HDAC11Q96DB2 347 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 NUDCD1Q96RS6 583 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 FERMT1Q9BQL6 677 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 C1QTNF7Q9BXJ2 289 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 POLR1EQ9GZS1 481 aaKnown RBP14.87□□□□□ -0.03
CHD1-202ENST00000414220 SLC32A1Q9H598 525 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 AMFRQ9UKV5 643 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 TFR2Q9UP52 801 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 ANKRD6Q9Y2G4 727 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 MYO15AQ9UKN7 3530 aa14.87□□□□□ -0.03
CHD1-202ENST00000414220 CHD5Q8TDI0 1954 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 A0A1B0GVT2 93 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 INSIG1O15503 277 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 KRT86O43790 486 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 PIGNO95427 931 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 PTMAP06454 111 aaKnown RBP14.86□□□□□ -0.03
CHD1-202ENST00000414220 HNRNPA2B1P22626 353 aaKnown RBP14.86□□□□□ -0.03
CHD1-202ENST00000414220 CA4P22748 312 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 COPS2P61201 443 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 PPP2CBP62714 309 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 PPP2CAP67775 309 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 SLC14A1Q13336 389 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 UGP2Q16851 508 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 TFDP3Q5H9I0 405 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 CCDC181Q5TID7 509 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 SPOCD1Q6ZMY3 1216 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 DGLUCYQ7Z3D6 616 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 IQCHQ86VS3 1027 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 OXR1Q8N573 874 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 RNF10Q8N5U6 811 aaKnown RBP14.86□□□□□ -0.03
CHD1-202ENST00000414220 UBL4BQ8N7F7 174 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 MFSD2AQ8NA29 543 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 SLC6A18Q96N87 628 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 MGME1Q9BQP7 344 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 SLC17A9Q9BYT1 436 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 GAREM1Q9H706 876 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 RXFP3Q9NSD7 469 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 RBM22Q9NW64 420 aaKnown RBP eCLIP14.86□□□□□ -0.03
CHD1-202ENST00000414220 DTLQ9NZJ0 730 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 REXO2Q9Y3B8 237 aaKnown RBP14.86□□□□□ -0.03
CHD1-202ENST00000414220 NUP205Q92621 2012 aa14.86□□□□□ -0.03
CHD1-202ENST00000414220 MACROD2A1Z1Q3 448 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 RCCD1A6NED2 376 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 UPK3BL1B0FP48 263 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 UPK3BL2E5RIL1 263 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 CDX4O14627 284 aaPredicted RBP14.85□□□□□ -0.03
CHD1-202ENST00000414220 SLC31A1O15431 190 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 SOCS5O75159 536 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 TM7SF2O76062 418 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 CCNB1P14635 433 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 TIMP2P16035 220 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 TGM2P21980 687 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 CTNNA1P35221 906 aaKnown RBP14.85□□□□□ -0.03
CHD1-202ENST00000414220 RWDD2BP57060 319 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 DYNLT1P63172 113 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 GBE1Q04446 702 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 AP1B1Q10567 949 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 KAZNQ674X7 775 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 MFSD7Q6UXD7 560 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 PEX26Q7Z412 305 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 CAMK1DQ8IU85 385 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 TEX26Q8N6G2 289 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 ASB12Q8WXK4 309 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 P3H4Q92791 437 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 KLHDC7BQ96G42 594 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 DESI2Q9BSY9 194 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 LACRTQ9GZZ8 138 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 NT5MQ9NPB1 228 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 GDF3Q9NR23 364 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
CHD1-202ENST00000414220 TTLL3Q9Y4R7 772 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 PCDHA3Q9Y5H8 950 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 DUSP10Q9Y6W6 482 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms