RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CCDC153Q494R4 210 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 PLPP4Q5VZY2 271 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 NEPROQ6NW34 567 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 FAM217AQ8IXS0 508 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 GBP7Q8N8V2 638 aaPredicted RBP19.13■□□□□ 0.65
USP39-202ENST00000409025 C2CD4AQ8NCU7 369 aaPredicted RBP19.13■□□□□ 0.65
USP39-202ENST00000409025 TTC16Q8NEE8 873 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 PHOSPHO2Q8TCD6 241 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 HERVK_113Q902F9 699 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 RMDN2Q96LZ7 410 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 TRIM55Q9BYV6 548 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 NOD2Q9HC29 1040 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 NPHS2Q9NP85 383 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 SCUBE2Q9NQ36 999 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 ASAH2Q9NR71 780 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 LCHNA4D1U4 455 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 C2orf71A6NGG8 1288 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 GFRA2O00451 464 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 INSIG1O15503 277 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 TGDSO95455 350 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 GABRB3P28472 473 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 SLC1A2P43004 574 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 SCNN1BP51168 640 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 MPP1Q00013 466 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 FASTKD1Q53R41 847 aaKnown RBP19.12■□□□□ 0.65
USP39-202ENST00000409025 PPM1LQ5SGD2 360 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 ZNF470Q6ECI4 717 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 KIAA0408Q6ZU52 694 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 MRPL43Q8N983 215 aaKnown RBP19.12■□□□□ 0.65
USP39-202ENST00000409025 ZNF398Q8TD17 642 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 C10orf82Q8WW14 230 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 CORO1BQ9BR76 489 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 TMEM216Q9P0N5 145 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 CFAP97Q9P2B7 532 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 GGT7Q9UJ14 662 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 ANKRD6Q9Y2G4 727 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 CCDC195A0A1B0GUA6 201 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 A0A1W2PRU2 124 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 CCL16O15467 120 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 CSPG5O95196 566 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 NDST3O95803 873 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 PROCP04070 461 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 C2P06681 752 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 PFKLP17858 780 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 ARF5P84085 180 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 BST1Q10588 318 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 OVGP1Q12889 678 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 CDH18Q13634 790 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 USP10Q14694 798 aaKnown RBP19.12■□□□□ 0.65
USP39-202ENST00000409025 FSCBQ5H9T9 825 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 RAPH1Q70E73 1250 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 HTR3DQ70Z44 454 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 PPP1R14CQ8TAE6 165 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 TLK1Q9UKI8 766 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 FBXO5Q9UKT4 447 aa19.12■□□□□ 0.65
USP39-202ENST00000409025 ALPK3Q96L96 1907 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 E2F8A0AVK6 867 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 HIDE1A8MVS5 230 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 SLC7A4O43246 635 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 CR2P20023 1033 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 RGRP47804 291 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 CD151P48509 253 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 LIG3P49916 1009 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 ACTN3Q08043 901 aaPredicted RBP19.11■□□□□ 0.65
USP39-202ENST00000409025 GALNT3Q14435 633 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 DLG2Q15700 870 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 CLEC14AQ86T13 490 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 ACVR1CQ8NER5 493 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 OR13J1Q8NGT2 312 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 BLOC1S5Q8TDH9 187 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 SLC22A17Q8WUG5 538 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 POF1BQ8WVV4 589 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 C7orf26Q96N11 449 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 TRIB3Q96RU7 358 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 FEM1AQ9BSK4 669 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 VPS28Q9UK41 221 aa19.11■□□□□ 0.65
USP39-202ENST00000409025 ARIH1Q9Y4X5 557 aaPredicted RBP19.11■□□□□ 0.65
USP39-202ENST00000409025 LDB2O43679 373 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 FSBPO95073 299 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 GSRP00390 522 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 HSPA1AP0DMV8 641 aaKnown RBP19.1■□□□□ 0.65
USP39-202ENST00000409025 HSPA1BP0DMV9 641 aaKnown RBP19.1■□□□□ 0.65
USP39-202ENST00000409025 GJA1P17302 382 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 SAT1P21673 171 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 MZF1P28698 734 aaPredicted RBP19.1■□□□□ 0.65
USP39-202ENST00000409025 CCDC15Q0P6D6 951 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 STX3Q13277 289 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 SPRED3Q2MJR0 410 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 TAF1BQ53T94 588 aaPredicted RBP19.1■□□□□ 0.65
USP39-202ENST00000409025 C7orf61Q8IZ16 206 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 CPXM2Q8N436 756 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 PEX13Q92968 403 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 EXOC2Q96KP1 924 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 TSNARE1Q96NA8 513 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 NUDCD1Q96RS6 583 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 TLR9Q9NR96 1032 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.1■□□□□ 0.654e-10■■■□□ 17.5
USP39-202ENST00000409025 RWDD3Q9Y3V2 267 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 FAM95CA0A1B0GW59 222 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 SNAP91O60641 907 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms