RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 IRF4Q15306 451 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 ZSCAN23Q3MJ62 389 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 CCDC14Q49A88 953 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 VWA3BQ502W6 1294 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 FAXCQ5TGI0 409 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 GDPD4Q6W3E5 623 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 MACC1Q6ZN28 852 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 CLEC14AQ86T13 490 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 ZSCAN30Q86W11 494 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 CCDC185Q8N715 623 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 KYQ8NBH2 561 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.48
LINC00544-201ENST00000400540 JOSD2Q8TAC2 188 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 EPS8L1Q8TE68 723 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 SLC20A1Q8WUM9 679 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 ASB12Q8WXK4 309 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 EPAS1Q99814 870 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 WRAP53Q9BUR4 548 aaKnown RBP12.08□□□□□ -0.48
LINC00544-201ENST00000400540 NAA15Q9BXJ9 866 aaKnown RBP12.08□□□□□ -0.48
LINC00544-201ENST00000400540 KLC2Q9H0B6 622 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 TMEM248Q9NWD8 314 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 SIRPGQ9P1W8 387 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 COQ6Q9Y2Z9 468 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 UNC13CQ8NB66 2214 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 HECTD1Q9ULT8 2610 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 CCDC187A0A096LP49 1063 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 CAPN8A6NHC0 703 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 NTN3O00634 580 aaPredicted RBP12.07□□□□□ -0.48
LINC00544-201ENST00000400540 INSIG1O15503 277 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 TM7SF2O76062 418 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 TMCC1O94876 653 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 LRIG2O94898 1065 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 LSM8O95777 96 aaKnown RBP12.07□□□□□ -0.48
LINC00544-201ENST00000400540 ANXA6P08133 673 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 HGFP14210 728 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 RHOQP17081 205 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 ADRA1BP35368 520 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
LINC00544-201ENST00000400540 MAPKAPK2P49137 400 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 RPIAP49247 311 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 NRG1Q02297 640 aaPredicted RBP12.07□□□□□ -0.48
LINC00544-201ENST00000400540 TPD52L1Q16890 204 aaPredicted RBP12.07□□□□□ -0.48
LINC00544-201ENST00000400540 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 MYLK3Q32MK0 819 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 KCTD16Q68DU8 428 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 CCDC81Q6ZN84 652 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 TTC7BQ86TV6 843 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 ARL14Q8N4G2 192 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 TPCN2Q8NHX9 752 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 PCDH19Q8TAB3 1148 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 GPT2Q8TD30 523 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 CXorf40AQ8TE69 158 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 RXFP2Q8WXD0 754 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 GLMNQ92990 594 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 NAT6Q93015 286 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 GRAMD1AQ96CP6 724 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 EXOC2Q96KP1 924 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 TUBGCP2Q9BSJ2 902 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 OSBPL1AQ9BXW6 950 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 FOXP3Q9BZS1 431 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 SLC13A1Q9BZW2 595 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 NOL6Q9H6R4 1146 aaKnown RBP12.07□□□□□ -0.48
LINC00544-201ENST00000400540 EPB41L5Q9HCM4 733 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 GULP1Q9UBP9 304 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 PADI4Q9UM07 663 aa12.07□□□□□ -0.48
LINC00544-201ENST00000400540 ARHGEF17Q96PE2 2063 aaPredicted RBP12.07□□□□□ -0.48
LINC00544-201ENST00000400540 F8VZ95 297 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 AGRPO00253 132 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 EFSO43281 561 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 KDELR3O43731 214 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 RAMP2O60895 175 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 PIGNO95427 931 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 POP4O95707 220 aaKnown RBP12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ITGA2BP08514 1039 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 UCHL3P15374 230 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 TIMP2P16035 220 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ETFBP38117 255 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 GEMIN4P57678 1058 aaKnown RBP12.06□□□□□ -0.48
LINC00544-201ENST00000400540 YPEL5P62699 121 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 PPARDQ03181 441 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 BECN1Q14457 450 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ALG11Q2TAA5 492 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ESRP1Q6NXG1 681 aaKnown RBP12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ARCQ7LC44 396 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 HID1Q8IV36 788 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 PYROXD2Q8N2H3 581 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 SDR16C5Q8N3Y7 309 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 MSANTD4Q8NCY6 345 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 SLC30A5Q8TAD4 765 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 TSACCQ96A04 125 aaPredicted RBP12.06□□□□□ -0.48
LINC00544-201ENST00000400540 TBC1D31Q96DN5 1066 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ARHGEF26Q96DR7 871 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 CCDC97Q96F63 343 aaPredicted RBP12.06□□□□□ -0.48
LINC00544-201ENST00000400540 MED8Q96G25 268 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms