RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TRIOO75962 3097 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 CCDC78A2IDD5 438 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 WASH3PC4AMC7 463 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 ALOX15BO15296 676 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 SRPRAP08240 638 aaKnown RBP21.4■■□□□ 1.02
CPNE1-204ENST00000397443 MLNP12872 115 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 CCNHP51946 323 aaPredicted RBP21.4■■□□□ 1.02
CPNE1-204ENST00000397443 ZNF234Q14588 700 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 EIF4HQ15056 248 aaKnown RBP21.4■■□□□ 1.02
CPNE1-204ENST00000397443 PON2Q15165 354 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 CCDC38Q502W7 563 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 CARD16Q5EG05 197 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 DENND5AQ6IQ26 1287 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 RANBP10Q6VN20 620 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 CEP128Q6ZU80 1094 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 PCDH20Q8N6Y1 951 aaKnown RBP21.4■■□□□ 1.02
CPNE1-204ENST00000397443 GRIN3AQ8TCU5 1115 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 ISG20Q96AZ6 181 aaKnown RBP21.4■■□□□ 1.02
CPNE1-204ENST00000397443 CEP44Q9C0F1 390 aa21.4■■□□□ 1.02
CPNE1-204ENST00000397443 PDHA1P08559 390 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 CES1P23141 567 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 RECQLP46063 649 aaPredicted RBP21.39■■□□□ 1.02
CPNE1-204ENST00000397443 AP1S1P61966 158 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 FAM193AP78312 1265 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 POU6F1Q14863 301 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 SLC1A5Q15758 541 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 PUS10Q3MIT2 529 aaKnown RBP21.39■■□□□ 1.02
CPNE1-204ENST00000397443 SIRPB2Q5JXA9 342 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 HDXQ7Z353 690 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 FRS2Q8WU20 508 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 UCMAQ8WVF2 138 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 RMDN1Q96DB5 314 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 SIGLEC10Q96LC7 697 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 TDRD1Q9BXT4 1180 aaKnown RBP21.39■■□□□ 1.02
CPNE1-204ENST00000397443 VPS37BQ9H9H4 285 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 BFARQ9NZS9 450 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 TEX264Q9Y6I9 313 aa21.39■■□□□ 1.02
CPNE1-204ENST00000397443 CXorf51AA0A1B0GTR3 108 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 SDR42E2A6NKP2 422 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 EIF3HO15372 352 aaKnown RBP eCLIP21.39■■□□□ 1.018e-7■■□□□ 13.6
CPNE1-204ENST00000397443 TIMM44O43615 452 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 PRKCGP05129 697 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 PIRTP0C851 137 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 BCL2L1Q07817 233 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 SLC29A2Q14542 456 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 MYLK3Q32MK0 819 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 PREPLQ4J6C6 727 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-204ENST00000397443 EGFLAMQ63HQ2 1017 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 SERPINA13PQ6UXR4 307 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 PALM2Q8IXS6 379 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 MREGQ8N565 214 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 LPCAT1Q8NF37 534 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 OR2A12Q8NGT7 310 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 ACOX2Q99424 681 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 FUT8Q9BYC5 575 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 EPB41L4BQ9H329 900 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 PABPC3Q9H361 631 aaKnown RBP21.39■■□□□ 1.01
CPNE1-204ENST00000397443 CACNA2D2Q9NY47 1150 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 PCDHB9Q9Y5E1 797 aa21.39■■□□□ 1.01
CPNE1-204ENST00000397443 RIPK2O43353 540 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 SASH3O75995 380 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 TTC4O95801 387 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 SSTR1P30872 391 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 WASP42768 502 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 SMAD1Q15797 465 aaKnown RBP21.38■■□□□ 1.01
CPNE1-204ENST00000397443 CES3Q6UWW8 571 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 NUDT18Q6ZVK8 323 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 TRMT10CQ7L0Y3 403 aaKnown RBP21.38■■□□□ 1.01
CPNE1-204ENST00000397443 OR2W6PQ8NHA6 318 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 FEM1CQ96JP0 617 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 SMIM14Q96QK8 99 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 LRRC4CQ9HCJ2 640 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 ZC3H7BQ9UGR2 993 aaKnown RBP21.38■■□□□ 1.01
CPNE1-204ENST00000397443 HCN2Q9UL51 889 aa21.38■■□□□ 1.01
CPNE1-204ENST00000397443 LOC285095A0A1B0GVY8 99 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 LOC730098B7Z3J9 87 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 GSRP00390 522 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 ATXN1LP0C7T5 689 aaKnown RBP21.37■■□□□ 1.01
CPNE1-204ENST00000397443 TDGQ13569 410 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 SEPT6Q14141 434 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 STAMBPL1Q96FJ0 436 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 ATP13A3Q9H7F0 1226 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 SAMD15Q9P1V8 674 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 CD72P21854 359 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 IL12RB1P42701 662 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 CFAP58Q5T655 872 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 RELL1Q8IUW5 271 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 EZH1Q92800 747 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-204ENST00000397443 DNASE1L2Q92874 299 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 PTPRN2Q92932 1015 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 TRIB3Q96RU7 358 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 EBNA1BP2Q99848 306 aaKnown RBP21.37■■□□□ 1.01
CPNE1-204ENST00000397443 PHACTR1Q9C0D0 580 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 PLAAQ9Y263 795 aa21.37■■□□□ 1.01
CPNE1-204ENST00000397443 TCF20Q9UGU0 1960 aaKnown RBP21.36■■□□□ 1.01
CPNE1-204ENST00000397443 NDST3O95803 873 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 PRLP01236 227 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 UGT2B4P06133 528 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 SLC8A1P32418 973 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 TIE1P35590 1138 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms