RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 NENFQ9UMX5 172 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 ASPMQ8IZT6 3477 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 AKAP13Q12802 2813 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 FAM221BA6H8Z2 402 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 DFFAO00273 331 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 FPGTO14772 594 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 AREL1O15033 823 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 C1SP09871 688 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 TMEM253P0C7T8 217 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 THEGLP0DJG4 465 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 RARAP10276 462 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 IL1R2P27930 398 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 EPHA8P29322 1005 aaPredicted RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 SERPINA4P29622 427 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 MAN1A1P33908 653 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 ARHGAP25P42331 645 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 RABIFP47224 123 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 SLC25A11Q02978 314 aaKnown RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 KRT81Q14533 505 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 PDK2Q15119 407 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 CYTH1Q15438 398 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 ASTE1Q2TB18 679 aaPredicted RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 HS1BP3Q53T59 392 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 KCNT1Q5JUK3 1230 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 ERAP2Q6P179 960 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 KYAT3Q6YP21 454 aaKnown RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 RAB44Q7Z6P3 723 aaPredicted RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 KDF1Q8NAX2 398 aaPredicted RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 OR6K2Q8NGY2 324 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 FAM71BQ8TC56 605 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 SAP25Q8TEE9 199 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 ADAMTS14Q8WXS8 1223 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 HSPH1Q92598 858 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 CSPG4P5Q96PW8 444 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 PSKH2Q96QS6 385 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 CINPQ9BW66 212 aaPredicted RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 KLC2Q9H0B6 622 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 SUV39H2Q9H5I1 410 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 KLHL11Q9NVR0 708 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 LHX3Q9UBR4 397 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 FTSJ1Q9UET6 329 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 IPO11Q9UI26 975 aaKnown RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 INTUQ9ULD6 942 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 ZFR2Q9UPR6 939 aaKnown RBP14.11□□□□□ -0.15
SEC13-204ENST00000397099 ACTL7AQ9Y615 435 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 USP24Q9UPU5 2620 aa14.11□□□□□ -0.15
SEC13-204ENST00000397099 SPEGQ15772 3267 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.1□□□□□ -0.15
SEC13-204ENST00000397099 TSPAN11A1L157 253 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 CFAP69A5D8W1 941 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 AKR1B15C9JRZ8 316 aaPredicted RBP14.1□□□□□ -0.15
SEC13-204ENST00000397099 J3KR12 359 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 WNT9AO14904 365 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 MFAP3LO75121 409 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 PROSCO94903 275 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 SSR1P43307 286 aaKnown RBP14.1□□□□□ -0.15
SEC13-204ENST00000397099 CDH6P55285 790 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 AP1S1P61966 158 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 SMTNL2Q2TAL5 461 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 CCDC157Q569K6 752 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 ATXN7L2Q5T6C5 722 aaPredicted RBP14.1□□□□□ -0.15
SEC13-204ENST00000397099 LEKR1Q6ZMV7 388 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 VSIG1Q86XK7 387 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 ARHGAP12Q8IWW6 846 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 RHOT2Q8IXI1 618 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 RNF214Q8ND24 703 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 CXorf40AQ8TE69 158 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 CELF6Q96J87 481 aaKnown RBP14.1□□□□□ -0.15
SEC13-204ENST00000397099 TMEM121BQ9BXQ6 578 aaPredicted RBP14.1□□□□□ -0.15
SEC13-204ENST00000397099 PCDH18Q9HCL0 1135 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 BTBD3Q9Y2F9 522 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 PCDHGA1Q9Y5H4 931 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 WDFY3Q8IZQ1 3526 aa14.1□□□□□ -0.15
SEC13-204ENST00000397099 TM7SF2O76062 418 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 PAK4O96013 591 aaPredicted RBP14.09□□□□□ -0.15
SEC13-204ENST00000397099 PRLRP16471 622 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 GKP32189 559 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 HNRNPKP61978 463 aaKnown RBP eCLIP14.09□□□□□ -0.15
SEC13-204ENST00000397099 YPEL5P62699 121 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 BCL2L1Q07817 233 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 PTK2BQ14289 1009 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 LBRQ14739 615 aaKnown RBP14.09□□□□□ -0.15
SEC13-204ENST00000397099 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 SRLQ86TD4 932 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 SLCO6A1Q86UG4 719 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 SPATS2Q86XZ4 545 aaKnown RBP14.09□□□□□ -0.15
SEC13-204ENST00000397099 GALNT15Q8N3T1 639 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 ATPAF2Q8N5M1 289 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 KCTD6Q8NC69 237 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 TSC1Q92574 1164 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 ZNF670Q9BS34 389 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 NHEJ1Q9H9Q4 299 aaPredicted RBP14.09□□□□□ -0.15
SEC13-204ENST00000397099 LUC7LQ9NQ29 371 aaKnown RBP14.09□□□□□ -0.15
SEC13-204ENST00000397099 EVA1BQ9NVM1 165 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 KCTD5Q9NXV2 234 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 ANKRD36A6QL64 1941 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 FREM2Q5SZK8 3169 aa14.09□□□□□ -0.15
SEC13-204ENST00000397099 ZFHX4Q86UP3 3567 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 NEMP2A6NFY4 417 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms