RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TTC23LQ6PF05 361 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 PPP1R21Q6ZMI0 780 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 CCDC81Q6ZN84 652 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SYDE1Q6ZW31 735 aaPredicted RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 BEND5Q7L4P6 421 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 DDX53Q86TM3 631 aaKnown RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 ZNF461Q8TAF7 563 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SERPINB12Q96P63 405 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 TTC1Q99614 292 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 ZBED2Q9BTP6 218 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 TUBB6Q9BUF5 446 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SIAEQ9HAT2 523 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 DNAJC17Q9NVM6 304 aaKnown RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 CRNNQ9UBG3 495 aaPredicted RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 PPM1HQ9ULR3 514 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 MCF2LO15068 1137 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 ABLIM3O94929 683 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 ATF2P15336 505 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 ARL4AP40617 200 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SCAPQ12770 1279 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 GPS1Q13098 491 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 LONRF1Q17RB8 773 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 MMEL1Q495T6 779 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 DARS2Q6PI48 645 aaKnown RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 ITIH5Q86UX2 942 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 LRRC6Q86X45 466 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 PSTKQ8IV42 348 aaKnown RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SNF8Q96H20 258 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 MRPL1Q9BYD6 325 aaKnown RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SMOC2Q9H3U7 446 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 AAASQ9NRG9 546 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 DTLQ9NZJ0 730 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 C6orf203Q9P0P8 240 aaPredicted RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 OR12D3Q9UGF7 316 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 GREB1Q4ZG55 1949 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 H7C0C1 242 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 FGF18O76093 207 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 S100BP04271 92 aaPredicted RBP19.19■□□□□ 0.66
CCDC50-202ENST00000392456 ENO2P09104 434 aaPredicted RBP19.19■□□□□ 0.66
CCDC50-202ENST00000392456 ATP5OP48047 213 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 SMARCB1Q12824 385 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 RHBDF2Q6PJF5 856 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 RFX8Q6ZV50 586 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 MTDHQ86UE4 582 aaKnown RBP19.19■□□□□ 0.66
CCDC50-202ENST00000392456 RAVER1Q8IY67 606 aaKnown RBP19.19■□□□□ 0.66
CCDC50-202ENST00000392456 CCDC89Q8N998 374 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 CHPT1Q8WUD6 406 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 CYTH2Q99418 400 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 SIK2Q9H0K1 926 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 NKIRAS1Q9NYS0 192 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 TAS2R1Q9NYW7 299 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 WHRNQ9P202 907 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 ERVK-11Q9UQG0 969 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 SLC38A8A6NNN8 435 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 ZNF487B1APH4 448 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 DNAJC6O75061 913 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 TGM2P21980 687 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 RBL1P28749 1068 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 AQP4P55087 323 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 IL9RQ01113 521 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 DNAJC3Q13217 504 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 DPYSQ14117 519 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 KYNUQ16719 465 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 SUN5Q8TC36 379 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 HERC2P3Q9BVR0 1158 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 CYP4F11Q9HBI6 524 aa19.19■□□□□ 0.66
CCDC50-202ENST00000392456 AFF4Q9UHB7 1163 aaKnown RBP19.19■□□□□ 0.66
CCDC50-202ENST00000392456 GOLGA8CPA6NN73 597 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 FOXO6A8MYZ6 492 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 EEF2KO00418 725 aaKnown RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 CDK2AP1O14519 115 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 MFSD11O43934 449 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 EDF1O60869 148 aaKnown RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 S100A5P33763 92 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 RPL22P35268 128 aaKnown RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 CALCOCO2Q13137 446 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 ARTNQ5T4W7 220 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 IZUMO3Q5VZ72 239 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 FIBCD1Q8N539 461 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 RSAD2Q8WXG1 361 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 NSL1Q96IY1 281 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 CCSER2Q9H7U1 834 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 GPAMQ9HCL2 828 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 LRIG2O94898 1065 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 CHEK2O96017 543 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 ITIH2P19823 946 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 EFEMP1Q12805 493 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 PDE1CQ14123 709 aaPredicted RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 TMCO4Q5TGY1 634 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 NET1Q7Z628 596 aaPredicted RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 CPSF7Q8N684 471 aaKnown RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 C2orf15Q8WU43 125 aaKnown RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 BORCS5Q969J3 196 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 LGMNQ99538 433 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 RSL24D1Q9UHA3 163 aaKnown RBP19.18■□□□□ 0.66
CCDC50-202ENST00000392456 ANAPC5Q9UJX4 755 aa19.18■□□□□ 0.66
CCDC50-202ENST00000392456 CLASP2O75122 1294 aaKnown RBP19.17■□□□□ 0.66
CCDC50-202ENST00000392456 MOCS2O96007 188 aaPredicted RBP19.17■□□□□ 0.66
CCDC50-202ENST00000392456 URODP06132 367 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms