RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 A0A1W2PPC4 97 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 TMEM247A6NEH6 219 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 POM121BA6NF01 834 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 NPIPB13A6NJU9 1138 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 SLC38A8A6NNN8 435 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 NPIPB5A8MRT5 1133 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 NPIPB4C9JG80 1138 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 E9PQ18 207 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 H7C423 109 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 GRM8O00222 908 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 HARSP12081 509 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 DPEP1P16444 411 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 GNB3P16520 340 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 PIGAP37287 484 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 TRA2BP62995 288 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 CDK18Q07002 472 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 AMZ1Q400G9 498 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 MINDY4Q4G0A6 757 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 DCAF6Q58WW2 860 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZNF569Q5MCW4 686 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZDHHC20Q5W0Z9 365 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 FAM53AQ6NSI3 398 aaPredicted RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 CXorf57Q6NSI4 855 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 HIBCHQ6NVY1 386 aaPredicted RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 GFRALQ6UXV0 394 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZNF852Q6ZMS4 543 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZC3HC1Q86WB0 502 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 TMEM219Q86XT9 240 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 APLFQ8IW19 511 aaPredicted RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 LINC00612Q8N6U2 182 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 OR4N2Q8NGD1 307 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 FGFBP3Q8TAT2 258 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 WDR20Q8TBZ3 569 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 TAAR8Q969N4 342 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 TEFMQ96QE5 360 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 RBM4BQ9BQ04 359 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 MMTAG2Q9BU76 263 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 CADM1Q9BY67 442 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 WDR6Q9NNW5 1121 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 FAF1Q9UNN5 650 aaPredicted RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 PCDHA10Q9Y5I2 948 aa1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 PDS5AQ29RF7 1337 aaKnown RBP1.36□□□□□ -2.19
RNU6-239P-201ENST00000390990 SMIM1B2RUZ4 78 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 DVL1O14640 695 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ARHGEF9O43307 516 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 PRKNO60260 465 aaPredicted RBP1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZIC3O60481 467 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 NDUFS7O75251 213 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 RFPL2O75678 378 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 LYL1P12980 280 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 GPR12P47775 334 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 DVL1P1P54792 670 aaPredicted RBP1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SLC8A3P57103 927 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ALKBH1Q13686 389 aaKnown RBP1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 KCNC3Q14003 757 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SNAI3Q3KNW1 292 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZFP69Q49AA0 526 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ATP13A5Q4VNC0 1218 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 STXBP5Q5T5C0 1151 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 RINT1Q6NUQ1 792 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SHFQ7M4L6 423 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SCN4BQ8IWT1 228 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 CCDC33Q8N5R6 958 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 BMPERQ8N8U9 685 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SCAIQ8N9R8 606 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 MCPH1Q8NEM0 835 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 RASSF8Q8NHQ8 419 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SLC20A1Q8WUM9 679 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 KCNJ9Q92806 393 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 NUP62CLQ9H1M0 184 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 CXorf56Q9H5V9 222 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ACAD9Q9H845 621 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 PLEKHA5Q9HAU0 1116 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 PDE11AQ9HCR9 933 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 SLC52A3Q9NQ40 469 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZDHHC18Q9NUE0 388 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 FAM118AQ9NWS6 357 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 C1RLQ9NZP8 487 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 ZNF624Q9P2J8 865 aaPredicted RBP1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 UPB1Q9UBR1 384 aa1.35□□□□□ -2.19
RNU6-239P-201ENST00000390990 C17orf100A8MU93 164 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 FAM157AC9JC47 383 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 SOCS6O14544 535 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 KPNA5O15131 536 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 HEXIM1O94992 359 aaKnown RBP1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 CD48P09326 243 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 DUX4L4P0CJ87 422 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 PRSS56P0CW18 603 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 ARSAP15289 507 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 ITGA2P17301 1181 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 CBLP22681 906 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 YWHAQP27348 245 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 DCTP40126 519 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 SF3A3Q12874 501 aaKnown RBP eCLIP1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 CHAF1AQ13111 956 aaPredicted RBP1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 ENPP2Q13822 863 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 GALEQ14376 348 aa1.34□□□□□ -2.19
RNU6-239P-201ENST00000390990 GRM3Q14832 879 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms