RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 POLD3Q15054 466 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 FOXR2Q6PJQ5 311 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 MACC1Q6ZN28 852 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 TTC7BQ86TV6 843 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 ZSCAN30Q86W11 494 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 TMEM35BQ8NCS4 154 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 TSACCQ96A04 125 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 CENPTQ96BT3 561 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 C18orf8Q96DM3 657 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 PGAP3Q96FM1 320 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 LIN37Q96GY3 246 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 EPAS1Q99814 870 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 STRADBQ9C0K7 418 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 NDFIP2Q9NV92 336 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 COQ6Q9Y2Z9 468 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 CHD5Q8TDI0 1954 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 UNC13CQ8NB66 2214 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 D6RAR5 112 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 JMJD7P0C870 316 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 MLLT3P42568 568 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 MTIF2P46199 727 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 CSRP3P50461 194 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 INHBCP55103 352 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 SNRPD1P62314 119 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 RAPGEF1Q13905 1077 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 IRF4Q15306 451 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 CDO1Q16878 200 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 KLHL40Q2TBA0 621 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 LINC00303Q3SY05 128 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 RAB6CQ53S08 254 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 TRNP1Q6NT89 227 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 NYAP1Q6ZVC0 841 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 VASH2Q86V25 355 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 XYLT1Q86Y38 959 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 ARL10Q8N8L6 244 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 Q8N9G6 341 aaPredicted RBP18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 OR2AP1Q8NGE2 309 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 SCG3Q8WXD2 468 aaKnown RBP18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 NT5C3BQ969T7 300 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 ARHGEF26Q96DR7 871 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 SGF29Q96ES7 293 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 HAPLN3Q96S86 360 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 C1QTNF7Q9BXJ2 289 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 RAB6CQ9H0N0 254 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 GPR34Q9UPC5 381 aa18.02■□□□□ 0.48
PDLIM4-202ENST00000379018 NTN3O00634 580 aaPredicted RBP18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 GSRP00390 522 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 FAM87AP0C7U9 286 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 ELOCQ15369 112 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 MYLK3Q32MK0 819 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 ARTNQ5T4W7 220 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 EMC1Q8N766 993 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 ASB12Q8WXK4 309 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 ARHGEF2Q92974 986 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 SIX2Q9NPC8 291 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 METTL5Q9NRN9 209 aaKnown RBP18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 IL17BQ9UHF5 180 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 HPCAL4Q9UM19 191 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 LOXL2Q9Y4K0 774 aa18.01■□□□□ 0.47
PDLIM4-202ENST00000379018 BOD1L1Q8NFC6 3051 aa18■□□□□ 0.47
PDLIM4-202ENST00000379018 POP4O95707 220 aaKnown RBP18■□□□□ 0.47
PDLIM4-202ENST00000379018 ITIH1P19827 911 aa18■□□□□ 0.47
PDLIM4-202ENST00000379018 XPAP23025 273 aaPredicted RBP18■□□□□ 0.47
PDLIM4-202ENST00000379018 ETFBP38117 255 aa18■□□□□ 0.47
PDLIM4-202ENST00000379018 YPEL5P62699 121 aa18■□□□□ 0.47
PDLIM4-202ENST00000379018 ACBD5Q5T8D3 534 aaPredicted RBP18■□□□□ 0.47
PDLIM4-202ENST00000379018 ENPP7Q6UWV6 458 aa18■□□□□ 0.47
PDLIM4-202ENST00000379018 GDPD4Q6W3E5 623 aa18■□□□□ 0.47
PDLIM4-202ENST00000379018 PHLDB2Q86SQ0 1253 aa18■□□□□ 0.47
PDLIM4-202ENST00000379018 FSTL5Q8N475 847 aaPredicted RBP18■□□□□ 0.47
PDLIM4-202ENST00000379018 TP53I13Q8NBR0 393 aaPredicted RBP18■□□□□ 0.47
PDLIM4-202ENST00000379018 ISG20Q96AZ6 181 aaKnown RBP18■□□□□ 0.47
PDLIM4-202ENST00000379018 A0A1W2PQM1 296 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 AREL1O15033 823 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 BUB1O43683 1085 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 ALPIP09923 528 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 BLKP51451 505 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 HK3P52790 923 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 MAPK10P53779 464 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 GEMIN4P57678 1058 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 EIF3IQ13347 325 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 ALG11Q2TAA5 492 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 MANEAQ5SRI9 462 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 GKN2Q86XP6 184 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 CPA5Q8WXQ8 436 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 TBATAQ96M53 351 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 OSBPL1AQ9BXW6 950 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 MAGEB5Q9BZ81 275 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 EDEM3Q9BZQ6 932 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 LRRN3Q9H3W5 708 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 PPARGC1AQ9UBK2 798 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 OR12D3Q9UGF7 316 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 PCDHGA7Q9Y5G6 932 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 LRRK1Q38SD2 2015 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 SCN8AQ9UQD0 1980 aa17.99■□□□□ 0.47
PDLIM4-202ENST00000379018 NOBOXO60393 691 aa17.98■□□□□ 0.47
PDLIM4-202ENST00000379018 RAMP2O60895 175 aa17.98■□□□□ 0.47
PDLIM4-202ENST00000379018 TMCC1O94876 653 aa17.98■□□□□ 0.47
PDLIM4-202ENST00000379018 RASGRP1O95267 797 aa17.98■□□□□ 0.47
PDLIM4-202ENST00000379018 PCCBP05166 539 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms