RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 SLC6A14Q9UN76 642 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 PACSIN2Q9UNF0 486 aaPredicted RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 TRPM6Q9BX84 2022 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 TP53BP1Q12888 1972 aaPredicted RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 LRRK1Q38SD2 2015 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 CACNA1EQ15878 2313 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 A0A1B0GTW7 788 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 TSPAN11A1L157 253 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 CCDC66A2RUB6 948 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 WNT9AO14904 365 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 BCAT2O15382 392 aaPredicted RBP20.75■□□□□ 0.91
TRIM13-203ENST00000378183 AP1G1O43747 822 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 FTCDO95954 541 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 CFIP05156 583 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 GNSP15586 552 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 PECAM1P16284 738 aaPredicted RBP20.75■□□□□ 0.91
TRIM13-203ENST00000378183 ITIH2P19823 946 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 MAT2AP31153 395 aaKnown RBP20.75■□□□□ 0.91
TRIM13-203ENST00000378183 HSPA9P38646 679 aaKnown RBP20.75■□□□□ 0.91
TRIM13-203ENST00000378183 PPIDQ08752 370 aaKnown RBP20.75■□□□□ 0.91
TRIM13-203ENST00000378183 TFDP2Q14188 446 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 GRM3Q14832 879 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 PPP2R5EQ16537 467 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 ZNF662Q6ZS27 426 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 PEX26Q7Z412 305 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 RABEPKQ7Z6M1 372 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 ZSWIM9Q86XI8 627 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 CCDC50Q8IVM0 306 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 CCDC13Q8IYE1 715 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 SYCE1Q8N0S2 351 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 CCNYQ8ND76 341 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 ZNF641Q96N77 438 aaPredicted RBP20.75■□□□□ 0.91
TRIM13-203ENST00000378183 NUDCD1Q96RS6 583 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 TSGA10Q9BZW7 698 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 TM9SF3Q9HD45 589 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 NT5MQ9NPB1 228 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 SUSD2Q9UGT4 822 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 GGT7Q9UJ14 662 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 ZFR2Q9UPR6 939 aaKnown RBP20.75■□□□□ 0.91
TRIM13-203ENST00000378183 ITM2BQ9Y287 266 aa20.75■□□□□ 0.91
TRIM13-203ENST00000378183 A0A1W2PQU0 124 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 AREL1O15033 823 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 DDX3YO15523 660 aaKnown RBP20.74■□□□□ 0.91
TRIM13-203ENST00000378183 KRT86O43790 486 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 FOXD2O60548 495 aaPredicted RBP20.74■□□□□ 0.91
TRIM13-203ENST00000378183 CCDC175P0C221 793 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 RWDD2BP57060 319 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 AP1S1P61966 158 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 LMNB2Q03252 620 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 AASDHQ4L235 1098 aaPredicted RBP20.74■□□□□ 0.91
TRIM13-203ENST00000378183 LRRC73Q5JTD7 316 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 FAM182AQ5T1J6 154 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 AADACL2Q6P093 401 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 NEK5Q6P3R8 708 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 B4GALNT4Q76KP1 1039 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 HCAR2Q8TDS4 363 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 RAB7BQ96AH8 199 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 ZNF830Q96NB3 372 aaPredicted RBP20.74■□□□□ 0.91
TRIM13-203ENST00000378183 HEMGNQ9BXL5 484 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 NUSAP1Q9BXS6 441 aaKnown RBP20.74■□□□□ 0.91
TRIM13-203ENST00000378183 ATP13A3Q9H7F0 1226 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 NOD2Q9HC29 1040 aa20.74■□□□□ 0.91
TRIM13-203ENST00000378183 TRAFD1O14545 582 aaPredicted RBP20.73■□□□□ 0.91
TRIM13-203ENST00000378183 PCDH8O95206 1070 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 PYGMP11217 842 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 CCNB1P14635 433 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 ENGP17813 658 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 TGM2P21980 687 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 COPS2P61201 443 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 BNC1Q01954 994 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 IHHQ14623 411 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 PDK1Q15118 436 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 ZNF284Q2VY69 593 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 TMEM259Q4ZIN3 620 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 SEL1L3Q68CR1 1132 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 TTC7BQ86TV6 843 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 PRPF39Q86UA1 669 aaKnown RBP20.73■□□□□ 0.91
TRIM13-203ENST00000378183 HORMAD1Q86X24 394 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 BBS5Q8N3I7 341 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 KLK6Q92876 244 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 ECHDC3Q96DC8 303 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 PDLIM2Q96JY6 352 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 SLC6A18Q96N87 628 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 SCUBE2Q9NQ36 999 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 LZTFL1Q9NQ48 299 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 RBM22Q9NW64 420 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRIM13-203ENST00000378183 TPX2Q9ULW0 747 aaKnown RBP20.73■□□□□ 0.91
TRIM13-203ENST00000378183 TMEM131Q92545 1883 aa20.73■□□□□ 0.91
TRIM13-203ENST00000378183 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.72■□□□□ 0.91
TRIM13-203ENST00000378183 KCNK1O00180 336 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 CDX4O14627 284 aaPredicted RBP20.72■□□□□ 0.91
TRIM13-203ENST00000378183 SERPINA4P29622 427 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 MAPK8P45983 427 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 NR2C2P49116 596 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 CSNK1EP49674 416 aaKnown RBP20.72■□□□□ 0.91
TRIM13-203ENST00000378183 BCL2L1Q07817 233 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 AP1B1Q10567 949 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 ZBTB17Q13105 803 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 LAYNQ6UX15 382 aa20.72■□□□□ 0.91
TRIM13-203ENST00000378183 BBS12Q6ZW61 710 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms