RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 NPEPPSL1A6NEC2 478 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 CPSF4LA6NMK7 179 aaKnown RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 FAM58BPP0C7Q3 252 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 IRAK1P51617 712 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 ATG14Q6ZNE5 492 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 SOCS4Q8WXH5 440 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 SGTAO43765 313 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 DLG4P78352 724 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ZNF720Q7Z2F6 126 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 SVOPQ8N4V2 548 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 OR5T3Q8NGG3 340 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 OR52K2Q8NGK3 314 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 RMND5BQ96G75 393 aaPredicted RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 ART5Q96L15 291 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ATP13A3Q9H7F0 1226 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 RASSF1Q9NS23 344 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 GRXCR2A6NFK2 248 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ENPP3O14638 875 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 SLC35G4P0C7Q5 338 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 PITRM1Q5JRX3 1037 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 AARSD1Q9BTE6 412 aaKnown RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 GTPBP2Q9BX10 602 aaKnown RBP16.44■□□□□ 0.22
RGP1-201ENST00000378078 OR12D3Q9UGF7 316 aa16.44■□□□□ 0.22
RGP1-201ENST00000378078 ANKRD63C9JTQ0 380 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 TAF4O00268 1085 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 ARL3P36405 182 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 TRIM40Q6P9F5 258 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 SV2AQ7L0J3 742 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 TOP1MTQ969P6 601 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 POPDC2Q9HBU9 364 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 TIMM8BQ9Y5J9 83 aaPredicted RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ZNF208O43345 1280 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 CYP4F8P98187 520 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ZNF155Q12901 538 aaPredicted RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 KIAA0319LQ8IZA0 1049 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ZCCHC7Q8N3Z6 543 aaKnown RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 NFASCO94856 1347 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 NKRFO15226 690 aaKnown RBP eCLIP16.43■□□□□ 0.22
RGP1-201ENST00000378078 BNC1Q01954 994 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 KRR1Q13601 381 aaKnown RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 NDUFA5Q16718 116 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 METTL21CQ5VZV1 264 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 IRGCQ6NXR0 463 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 C12orf29Q8N999 325 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ELOVL2Q9NXB9 296 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 NRG3P56975 720 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.43■□□□□ 0.22
RGP1-201ENST00000378078 FAM192AQ9GZU8 254 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 U3KQV3 271 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 MED26O95402 600 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 SERPINA3P01011 423 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 CFIP05156 583 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 BCAP31P51572 246 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 SEMG2Q02383 582 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 CPSF6Q16630 551 aaKnown RBP eCLIP16.43■□□□□ 0.22
RGP1-201ENST00000378078 TMPRSS11BQ86T26 416 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ZDHHC13Q8IUH4 622 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 RAVER1Q8IY67 606 aaKnown RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 DCLK3Q9C098 648 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 TMBIM4Q9HC24 238 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
RGP1-201ENST00000378078 NCAM2O15394 837 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 NELFEP18615 380 aaKnown RBP16.43■□□□□ 0.22
RGP1-201ENST00000378078 MIPP30301 263 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 LRP8Q14114 963 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 MCOLN2Q8IZK6 566 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 CLIP4Q8N3C7 705 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 ZNF606Q8WXB4 792 aa16.43■□□□□ 0.22
RGP1-201ENST00000378078 OR4Q2P0C623 313 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 GRIA3P42263 894 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 MANFP55145 182 aaKnown RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 SLC6A3Q01959 620 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 UBAP2LQ14157 1087 aaKnown RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 SLC30A6Q6NXT4 461 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 NUAK2Q9H093 628 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 C17orf75Q9HAS0 396 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 IKZF2Q9UKS7 526 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 WWP2O00308 870 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PROCP04070 461 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 LGALS2P05162 132 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 TNFSF9P41273 254 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 ZNF433Q8N7K0 673 aaPredicted RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 CHST4Q8NCG5 386 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 OR10H5Q8NGA6 315 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 NELL1Q92832 810 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 CEP295NLQ96MC4 621 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 DPEP2Q9H4A9 486 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PPCSQ9HAB8 311 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 ABCB10Q9NRK6 738 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PSME2Q9UL46 239 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 MDM4O15151 490 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 C9P02748 559 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 KCNJ5P48544 419 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms