RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 NDNQ99608 321 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 NPAS2Q99743 824 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 MRPL57Q9BQC6 102 aaKnown RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 UBE2OQ9C0C9 1292 aaKnown RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 POMKQ9H5K3 350 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 NOL6Q9H6R4 1146 aaKnown RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 MRM3Q9HC36 420 aaKnown RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 CHST12Q9NRB3 414 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 CLIC5Q9NZA1 410 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 PCDHGB4Q9UN71 923 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 Q9Y3F1 56 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 DTNAQ9Y4J8 743 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 PCDHGB5Q9Y5G0 923 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 ACOT8O14734 319 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 PEX11BO96011 259 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 IGHA2P01877 340 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 ROR2Q01974 943 aaKnown RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 SULT2A1Q06520 285 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 MAP3K21Q5TCX8 1036 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 CWF19L1Q69YN2 538 aaKnown RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 GDF6Q6KF10 455 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 NEPROQ6NW34 567 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 PIWIL4Q7Z3Z4 852 aaKnown RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 MRPL10Q7Z7H8 261 aaKnown RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 SETD3Q86TU7 594 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 TICAM1Q8IUC6 712 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 LZTR1Q8N653 840 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 ZFAND2BQ8WV99 257 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 DCUN1D1Q96GG9 259 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 SPATA16Q9BXB7 569 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 FSD1LQ9BXM9 530 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 SMOC2Q9H3U7 446 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 NMUR1Q9HB89 426 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 NCKIPSDQ9NZQ3 722 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 FGF10O15520 208 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 DNAJA2O60884 412 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 HSPA1AP0DMV8 641 aaKnown RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 HSPA1BP0DMV9 641 aaKnown RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 CPB1P15086 417 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 ATP5F1P24539 256 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 CCR1P32246 355 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 SLC5A3P53794 718 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 ATXN3P54252 364 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 DNAJB13P59910 316 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 C1QTNF8P60827 252 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 POU4F1Q01851 419 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 CSHL1Q14406 222 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 RFTN1Q14699 578 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 EML3Q32P44 896 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 CNPY1Q3B7I2 92 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 TECRLQ5HYJ1 363 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 BTBD8Q5XKL5 378 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 KDELC1Q6UW63 502 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 SDCCAG8Q86SQ7 713 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 FAM156AQ8NDB6 213 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 ICA1LQ8NDH6 482 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 BHLHE22Q8NFJ8 381 aaPredicted RBP11.03□□□□□ -0.64
BEST1-201ENST00000378043 CATSPERBQ9H7T0 1116 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 EFCAB1Q9HAE3 211 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 ABCC13Q9NSE7 274 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 OSER1Q9NX31 292 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 UBAP1Q9NZ09 502 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 HS3ST4Q9Y661 456 aa11.03□□□□□ -0.64
BEST1-201ENST00000378043 A0A087X1B8 175 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 KCNU1A8MYU2 1149 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 M0QZ92 97 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 M0QZQ0 153 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 BCAS2O75934 225 aaPredicted RBP11.02□□□□□ -0.64
BEST1-201ENST00000378043 GSTT1P30711 240 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 WNT3AP56704 352 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 RPL26P61254 145 aaKnown RBP11.02□□□□□ -0.64
BEST1-201ENST00000378043 SEPT6Q14141 434 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 ADGRE1Q14246 886 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 PCSK7Q16549 785 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 CHSY3Q70JA7 882 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 RTL3Q8N8U3 475 aaKnown RBP11.02□□□□□ -0.64
BEST1-201ENST00000378043 SPPL2BQ8TCT7 592 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 CYP4F12Q9HCS2 524 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 MTF2Q9Y483 593 aaPredicted RBP11.02□□□□□ -0.64
BEST1-201ENST00000378043 TLL2Q9Y6L7 1015 aa11.02□□□□□ -0.64
BEST1-201ENST00000378043 PRSS51A0A1B0GVH4 220 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 E9PAM4 449 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 TXNDC9O14530 226 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 DENRO43583 198 aaKnown RBP11.02□□□□□ -0.65
BEST1-201ENST00000378043 AP1G1O43747 822 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 MOCS2O96007 188 aaPredicted RBP11.02□□□□□ -0.65
BEST1-201ENST00000378043 CAPNS1P04632 268 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 ME2P23368 584 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 CHN2P52757 468 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 ART3Q13508 389 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 CXCL17Q6UXB2 119 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 GK5Q6ZS86 529 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 ST13P4Q8IZP2 240 aaPredicted RBP11.02□□□□□ -0.65
BEST1-201ENST00000378043 OR13J1Q8NGT2 312 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 CEP70Q8NHQ1 597 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 ANKRD49Q8WVL7 239 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms