RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 KCNE2Q9Y6J6 123 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CCDC154A6NI56 674 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 SIGLEC16A6NMB1 481 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 B8ZZF3 427 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 G3V2T6 193 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 MATN1P21941 496 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 PLK1P53350 603 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CYP4F2P78329 520 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 PURAQ00577 322 aaKnown RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 CYP4F3Q08477 520 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 DUOXA2Q1HG44 320 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 DNAJC14Q6Y2X3 702 aaPredicted RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 BBS12Q6ZW61 710 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 RFPL4BQ6ZWI9 263 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 TICAM1Q8IUC6 712 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 UBE2J2Q8N2K1 259 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 CADM2Q8N3J6 435 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 NKD2Q969F2 451 aaPredicted RBP10.33□□□□□ -0.76
CD28-202ENST00000374481 TOP1MTQ969P6 601 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 HDAC10Q969S8 669 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 SLC4A9Q96Q91 983 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 DCSTAMPQ9H295 470 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 LRRC4Q9HBW1 653 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 PTPRHQ9HD43 1115 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 GPATCH2LQ9NWQ4 482 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 ABCG2Q9UNQ0 655 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 PCDHB12Q9Y5F1 795 aa10.33□□□□□ -0.76
CD28-202ENST00000374481 ATP6AP2A0A1C7CYW4 349 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 AXIN1O15169 862 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 ABCB7O75027 752 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 ATP6AP2O75787 350 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 AMHP03971 560 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 NTRK1P04629 796 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 GLDCP23378 1020 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TIE1P35590 1138 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 CRADDP78560 199 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 GK3PQ14409 553 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 CACHD1Q5VU97 1274 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 LIPMQ5VYY2 423 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TP53INP1Q96A56 240 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 HOPXQ9BPY8 73 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 MLPHQ9BV36 600 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 MAGEB5Q9BZ81 275 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TMEM161AQ9NX61 479 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 RDH8Q9NYR8 311 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.32□□□□□ -0.76
CD28-202ENST00000374481 ZNHIT2Q9UHR6 403 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 BUD23O43709 281 aaKnown RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 ARHGEF15O94989 841 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 RBP1P09455 135 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 KDELR1P24390 212 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 ITGA1P56199 1179 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 GCNT1Q02742 428 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TNFAIP8L3Q5GJ75 292 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 RHBDF2Q6PJF5 856 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 DPY19L3Q6ZPD9 716 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 CHSY3Q70JA7 882 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 RTL3Q8N8U3 475 aaKnown RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 URGCPQ8TCY9 931 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 HSFY1Q96LI6 401 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 MAT2BQ9NZL9 334 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 HSFX1Q9UBD0 423 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 PLCL2Q9UPR0 1127 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 MYH6P13533 1939 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 UNCXA6NJT0 531 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 H0YJX3 145 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 MTA2O94776 668 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 FTH1P02794 183 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 NPR3P17342 541 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 GRIK1P39086 918 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 INSCQ1MX18 579 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 ZNF404Q494X3 552 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 BICRALQ6AI39 1079 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 CNSTQ6PJW8 725 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TMPRSS11AQ6ZMR5 421 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 VASH1Q7L8A9 365 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 ZNF605Q86T29 641 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 FAM126BQ8IXS8 530 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 MYDGFQ969H8 173 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TEKT5Q96M29 485 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 IDI2Q9BXS1 227 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 POMKQ9H5K3 350 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 SNX15Q9NRS6 342 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 ZNF624Q9P2J8 865 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 DUSP12Q9UNI6 340 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TESMINQ9Y4I5 508 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 UBA6A0AVT1 1052 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 RGS7P49802 495 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 RAD51Q06609 339 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 DLGAP5Q15398 846 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 STK11Q15831 433 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 NFE2Q16621 373 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 SLC9B1Q4ZJI4 515 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 PITRM1Q5JRX3 1037 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 RBM48Q5RL73 367 aaKnown RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 UNC5AQ6ZN44 842 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 KDELC2Q7Z4H8 507 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TBC1D15Q8TC07 691 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms