RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 GTPBP2Q9BX10 602 aaKnown RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 A8MUI8 341 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 MLYCDO95822 493 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 FTH1P02794 183 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 RRM1P23921 792 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 RBM34P42696 430 aaKnown RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 PLD1Q13393 1074 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 XKR3Q5GH77 459 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF517Q6ZMY9 492 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 PHB2Q99623 299 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 DCP1AQ9NPI6 582 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 FAM171BQ6P995 826 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF571Q7Z3V5 609 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 SMG7Q92540 1137 aaKnown RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 TBX20Q9UMR3 447 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 PLA2G4CQ9UP65 541 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 RSL1D1O76021 490 aaKnown RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 NLNQ9BYT8 704 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 EGFL7Q9UHF1 273 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 F9P00740 461 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 FDPSP14324 419 aaKnown RBP15.37■□□□□ 0.05
COL5A1-201ENST00000371817 SYCE2Q6PIF2 218 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 KCND1Q9NSA2 647 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 TAS2R7Q9NYW3 318 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 EFCAB9A8MZ26 197 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 CENPBD1B2RD01 187 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ANGPTL1O95841 491 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 SLC6A2P23975 617 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 HECTD3Q5T447 861 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ATF7IP2Q5U623 682 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ARMC10Q8N2F6 343 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 ELMO1Q92556 727 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 TAS2R1Q9NYW7 299 aa15.37■□□□□ 0.05
COL5A1-201ENST00000371817 CCR4P51679 360 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ELMOD2Q8IZ81 293 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ITCHQ96J02 903 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 NT5MQ9NPB1 228 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ATP7BP35670 1465 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 FABP12A6NFH5 140 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 BTN3A1O00481 513 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 OGTO15294 1046 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 SGTAO43765 313 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 OVOS1Q6IE37 1185 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 KCTD8Q6ZWB6 473 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 MTMR8Q96EF0 704 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 MAGEL2Q9UJ55 1249 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 MEMO1Q9Y316 297 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ECHS1P30084 290 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 GNG2P59768 71 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 CDKL4Q5MAI5 379 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 HYIQ5T013 277 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 LPCAT1Q8NF37 534 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 TLR10Q9BXR5 811 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 TM7SF2O76062 418 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 H6PDO95479 791 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 SLC11A2P49281 568 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 MAB21L1Q13394 359 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 CYP4V2Q6ZWL3 525 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 USP49Q70CQ1 688 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 NELL1Q92832 810 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 RCN3Q96D15 328 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 HOPXQ9BPY8 73 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 KCNK1O00180 336 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 TFRCP02786 760 aaKnown RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 IGFBP5P24593 272 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 GRK5P34947 590 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 LIPMQ5VYY2 423 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 CXorf57Q6NSI4 855 aaKnown RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ACMSDQ8TDX5 336 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF717Q9BY31 904 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 DBNDD1Q9H9R9 158 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 CCDC177Q9NQR7 707 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 VPS51Q9UID3 782 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 SAMD4AQ9UPU9 718 aaKnown RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 PRRG1O14668 218 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ITGA2BP08514 1039 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 PBLDP30039 288 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 RTP1P59025 263 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 C12orf50Q8NA57 414 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ERLEC1Q96DZ1 483 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 MED24O75448 989 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 RAD17O75943 681 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 OXCT1P55809 520 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 FAM92BQ6ZTR7 304 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 GALNT12Q8IXK2 581 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 OR2L5Q8NG80 312 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 MCOLN3Q8TDD5 553 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 TRIM43Q96BQ3 446 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-201ENST00000371817 ARHGAP20Q9P2F6 1191 aa15.36■□□□□ 0.05
COL5A1-201ENST00000371817 F5H5T6 163 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 RORCP51449 518 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 SNAPC1Q16533 368 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 RAB12Q6IQ22 244 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 OR2T34Q8NGX1 318 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 OR2T3Q8NH03 318 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 IL22Q9GZX6 179 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 SNX6Q9UNH7 406 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms