RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SPIDRQ14159 915 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 TPSAB1Q15661 275 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 RFX4Q33E94 735 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 FAM117BQ6P1L5 589 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 ZNF467Q7Z7K2 595 aaPredicted RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 ZNF614Q8N883 585 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 PPP3R2Q96LZ3 170 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 PANX3Q96QZ0 392 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 HOPXQ9BPY8 73 aaPredicted RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 TRMOQ9BU70 441 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 LHX5Q9H2C1 402 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 ZNF180Q9UJW8 692 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 FOXN2P32314 431 aa17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 UGCGQ16739 394 aa17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 RFWD3Q6PCD5 774 aa17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 C10orf53Q8N6V4 93 aa17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 ST13P5Q8NFI4 369 aaPredicted RBP17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 MYDGFQ969H8 173 aa17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 MRPL48Q96GC5 212 aaKnown RBP17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 SLC25A13Q9UJS0 675 aa17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 TRAF6Q9Y4K3 522 aa17.27■□□□□ 0.35
PTP4A1-201ENST00000370651 PAICSP22234 425 aaKnown RBP17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 CDC42P60953 191 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 SCIMPQ6UWF3 145 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 GALNT15Q8N3T1 639 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 CDYL2Q8N8U2 506 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 NACC2Q96BF6 587 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 ZDHHC18Q9NUE0 388 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 ARL15Q9NXU5 204 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 BBIP1A8MTZ0 92 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 MTA2O94776 668 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 FESP07332 822 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 CRY1Q16526 586 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 ANKRD22Q5VYY1 191 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 ATG14Q6ZNE5 492 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 OFCC1Q8IZS5 231 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 PGAM4Q8N0Y7 254 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 TMEM159Q96B96 161 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 ATP6V1HQ9UI12 483 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 CNPP09543 421 aaKnown RBP17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 IL12AP29459 219 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 C11orf88Q6PI97 169 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 VSTM1Q6UX27 236 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 CUZD1Q86UP6 607 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 TMEM86AQ8N2M4 240 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 OR52K2Q8NGK3 314 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 RAET1EQ8TD07 263 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 ABCC13Q9NSE7 274 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 GSTK1Q9Y2Q3 226 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 LRCH4O75427 683 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 MAFO75444 373 aaPredicted RBP17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 IL6P05231 212 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 CLTBP09497 229 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 FGFR1P11362 822 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 HPCAL1P37235 193 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 PPIL2Q13356 520 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 HIPK1Q86Z02 1210 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 LGI2Q8N0V4 545 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 CDK5RAP1Q96SZ6 601 aaKnown RBP17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 IKZF3Q9UKT9 509 aa17.26■□□□□ 0.35
PTP4A1-201ENST00000370651 ERBB2P04626 1255 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 CAPN1P07384 714 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 DGKAP23743 735 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 CAPZA2P47755 286 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 ACSBG2Q5FVE4 666 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 GPRIN3Q6ZVF9 776 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 PROX1Q92786 737 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 REXO5Q96IC2 774 aaKnown RBP17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 C8orf4Q9NR00 106 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 TK2O00142 265 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 NKRFO15226 690 aaKnown RBP eCLIP17.25■□□□□ 0.351e-8■■□□□ 12.5
PTP4A1-201ENST00000370651 PPP1R11O60927 126 aaPredicted RBP17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 OR56A5P0C7T3 313 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 GRK3P35626 688 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 MATKP42679 507 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 MMP14P50281 582 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 CDH13P55290 713 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 FSTL1Q12841 308 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 MZT2BQ6NZ67 158 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 MTFMTQ96DP5 389 aaKnown RBP17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 CCNB1IP1Q9NPC3 277 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 ZNF624Q9P2J8 865 aaPredicted RBP17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 NID2Q14112 1375 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 LINC00032P0C843 101 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 YWHAQP27348 245 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 TRAP1Q12931 704 aaKnown RBP17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 CYP1B1Q16678 543 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 VWA5B1Q5TIE3 1220 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 POTEHQ6S545 545 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 OLFML1Q6UWY5 402 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 TMEM169Q96HH4 297 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 GLT1D1Q96MS3 346 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 PTTG2Q9NZH5 202 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 LRG1P02750 347 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms