RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SIK2Q9H0K1 926 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 TRPV6Q9H1D0 765 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 POMKQ9H5K3 350 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 ZNF408Q9H9D4 720 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 IGSF5Q9NSI5 407 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 FLRT1Q9NZU1 646 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 RIMS3Q9UJD0 308 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 ZNF638Q14966 1978 aaKnown RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 CCDC78A2IDD5 438 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 TCAF2A6NFQ2 919 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 CASTOR2A6NHX0 329 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 M0QZQ0 153 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 TRIM38O00635 465 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 HLA-DQB2P05538 268 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 RBP1P09455 135 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 ENO3P13929 434 aaPredicted RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 SLC26A3P40879 764 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 POLE2P56282 527 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 STX5Q13190 355 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 RBBP5Q15291 538 aaKnown RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 SLC14A2Q15849 920 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 TECRLQ5HYJ1 363 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 BTBD8Q5XKL5 378 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 TMEM198Q66K66 360 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 SLC22A9Q8IVM8 553 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 THEM5Q8N1Q8 247 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 HEXDCQ8WVB3 486 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 FCRL2Q96LA5 508 aaPredicted RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 MRGPRX2Q96LB1 330 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 UROC1Q96N76 676 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 PTPN18Q99952 460 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 OMDQ99983 421 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 TRMOQ9BU70 441 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 MRPL1Q9BYD6 325 aaKnown RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 SENP6Q9GZR1 1112 aaPredicted RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 SLC25A51Q9H1U9 297 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 OSER1Q9NX31 292 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 PLK2Q9NYY3 685 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 SLC2A6Q9UGQ3 507 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 G3BP2Q9UN86 482 aaKnown RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 COMMD3-BMI1R4GMX3 469 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 C15orf38-AP3S2A0A0A6YYH1 394 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 PRSS51A0A1B0GVH4 220 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 EME2A4GXA9 379 aaPredicted RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 CAPN8A6NHC0 703 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 ACOT8O14734 319 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 GPR182O15218 404 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 ZNF623O75123 536 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 PENKP01210 267 aaPredicted RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 LTA4HP09960 611 aaKnown RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 LEPRP48357 1165 aaKnown RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 AFF1P51825 1210 aaKnown RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 TSPY1Q01534 308 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 SQLEQ14534 574 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 CNPY1Q3B7I2 92 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 ARTNQ5T4W7 220 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 KDELC1Q6UW63 502 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 ARPINQ7Z6K5 226 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 LPPQ93052 612 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 ZNF419Q96HQ0 510 aaPredicted RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 PPP1R36Q96LQ0 422 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 MEAF6Q9HAF1 191 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 ATP13A1Q9HD20 1204 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 VCX3AQ9NNX9 186 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 VPS45Q9NRW7 570 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 EPS15L1Q9UBC2 864 aa14.42□□□□□ -0.1
CD48-201ENST00000368045 CNOT11Q9UKZ1 510 aaKnown RBP14.42□□□□□ -0.1
CD48-201ENST00000368045 TXNDC9O14530 226 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 CFLARO15519 480 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 PMPCBO75439 489 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 IPO13O94829 963 aaKnown RBP14.41□□□□□ -0.1
CD48-201ENST00000368045 JUNP05412 331 aaKnown RBP14.41□□□□□ -0.1
CD48-201ENST00000368045 GSTT1P30711 240 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 INHBCP55103 352 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 WNT3AP56704 352 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 MRPS22P82650 360 aaKnown RBP14.41□□□□□ -0.1
CD48-201ENST00000368045 SULT2A1Q06520 285 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 SEPT6Q14141 434 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 ZNF460Q14592 562 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 BHLHE22Q8NFJ8 381 aaPredicted RBP14.41□□□□□ -0.1
CD48-201ENST00000368045 ASB9Q96DX5 294 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 MOCOSQ96EN8 888 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 C1orf74Q96LT6 269 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 MTG1Q9BT17 334 aaPredicted RBP14.41□□□□□ -0.1
CD48-201ENST00000368045 TMLHEQ9NVH6 421 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 GTSE1Q9NYZ3 720 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 SUCOQ9UBS9 1254 aaKnown RBP14.41□□□□□ -0.1
CD48-201ENST00000368045 IPO11Q9UI26 975 aaKnown RBP14.41□□□□□ -0.1
CD48-201ENST00000368045 SARDHQ9UL12 918 aa14.41□□□□□ -0.1
CD48-201ENST00000368045 GLTPD2A6NH11 291 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 KCNU1A8MYU2 1149 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 E9PAM4 449 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 H0YJX3 145 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 DNAJA2O60884 412 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 B3GAT3O94766 335 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 CHRM1P11229 460 aaPredicted RBP14.4□□□□□ -0.1
CD48-201ENST00000368045 TYMPP19971 482 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 ATP4BP51164 291 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 RENBPP51606 427 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 NDST2P52849 883 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms