RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TAC4Q86UU9 113 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ANKDD1BA6NHY2 528 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ALG9Q9H6U8 611 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 KANSL1LA0AUZ9 987 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 SEC22BO75396 215 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 CCND1P24385 295 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 DAOAP59103 153 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ZNF792Q3KQV3 632 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ATL1Q8WXF7 558 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 FFAR2O15552 330 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 PIGNO95427 931 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 IFNA14P01570 189 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 SEMG2Q02383 582 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 GBE1Q04446 702 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 TIGD5Q53EQ6 642 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 TEX44Q53QW1 395 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 FAM45BPQ6NSW5 357 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 FAM45AQ8TCE6 357 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 MAGEC3Q8TD91 643 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
SYNE1-204ENST00000367248 CAAP1Q9H8G2 361 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 MINDY3Q9H8M7 445 aa11.68□□□□□ -0.54
SYNE1-204ENST00000367248 EVLQ9UI08 416 aaPredicted RBP11.68□□□□□ -0.54
SYNE1-204ENST00000367248 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 CALB2P22676 271 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 GATMP50440 423 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 FOXM1Q08050 763 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 DNAJC14Q6Y2X3 702 aaPredicted RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 ANKS1BQ7Z6G8 1248 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 NOCTQ9UK39 431 aaKnown RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 ASF1AQ9Y294 204 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 MYO5BQ9ULV0 1848 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 A0A0U1RQF3 1178 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 TPP1O14773 563 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 KPNA5O15131 536 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 GRM6O15303 877 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 HTR7P34969 479 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 PARP15Q460N3 678 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 ZCCHC23Q6ZST2 131 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 GALNT4Q8N4A0 578 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 PTGR2Q8N8N7 351 aaPredicted RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 OSCP1Q8WVF1 389 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 GNPTGQ9UJJ9 305 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 ALOX15BO15296 676 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 COL6A1P12109 1028 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 JAM2P57087 298 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 AMZ1Q400G9 498 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 P3H2Q8IVL5 708 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 PRSS58Q8IYP2 241 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 FNDC5Q8NAU1 212 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 POMKQ9H5K3 350 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 FCHO1O14526 889 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 PMM2O15305 246 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 CSF2RAP15509 400 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 NAGLUP54802 743 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 C2orf15Q8WU43 125 aaKnown RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 ROBO1Q9Y6N7 1651 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 SLC35G4P0C7Q5 338 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 CCDC166P0CW27 439 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 AUHQ13825 339 aaKnown RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 PAGE2BQ5JRK9 111 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 TSTD1Q8NFU3 115 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 SEMA4BQ9NPR2 832 aaPredicted RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 COG5Q9UP83 839 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 LMO2P25791 158 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 MYO19Q96H55 970 aa11.67□□□□□ -0.54
SYNE1-204ENST00000367248 R3HDM2Q9Y2K5 976 aaKnown RBP11.67□□□□□ -0.54
SYNE1-204ENST00000367248 ZNF682O95780 498 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 FSHRP23945 695 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 ATP5F1P24539 256 aaPredicted RBP11.66□□□□□ -0.54
SYNE1-204ENST00000367248 L1CAMP32004 1257 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 GRM2Q14416 872 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 SAPCD2Q86UD0 394 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 FAM228AQ86W67 206 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 RERGQ96A58 199 aaPredicted RBP11.66□□□□□ -0.54
SYNE1-204ENST00000367248 PCDHA11Q9Y5I1 949 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 MFSD11O43934 449 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 LRIG2O94898 1065 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 TNFRSF8P28908 595 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 GRM3Q14832 879 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 WLSQ5T9L3 541 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 TMEM139Q8IV31 216 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 PLD5Q8N7P1 536 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 RELTQ969Z4 430 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 HGH1Q9BTY7 390 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 RNF39Q9H2S5 420 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 SYBUQ9NX95 663 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 TCEA1P23193 301 aaKnown RBP11.66□□□□□ -0.54
SYNE1-204ENST00000367248 SOWAHAQ2M3V2 549 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 CYGBQ8WWM9 190 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 VPS50Q96JG6 964 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 PWWP2AQ96N64 755 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 CATSPER2Q96P56 530 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 OLFM3Q96PB7 478 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 IL12RB2Q99665 862 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 PCDHGA4Q9Y5G9 962 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 ACTL7BQ9Y614 415 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 C9IYK1 514 aa11.66□□□□□ -0.54
SYNE1-204ENST00000367248 NRP1O14786 923 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms