RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 LRFN5Q96NI6 719 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 DUX3Q96PT4 197 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 TRAPPC9Q96Q05 1148 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 CHST12Q9NRB3 414 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 BCCIPQ9P287 314 aaKnown RBP eCLIP2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 CHPF2Q9P2E5 772 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 NLKQ9UBE8 527 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 SIX4Q9UIU6 781 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 VDAC3Q9Y277 283 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 SNX9Q9Y5X1 595 aa2.42□□□□□ -2.02
RNU4-42P-201ENST00000364738 A0A087WV62 115 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 CPED1A4D0V7 1026 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SERINC4A6NH21 518 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 FAM90A20PA6NIJ5 464 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ACKR2O00590 384 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SEPT4O43236 478 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 EDIL3O43854 480 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 TIPRLO75663 272 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 PARNO95453 639 aaKnown RBP2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 CLDN14O95500 239 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 TBX6O95947 436 aaPredicted RBP2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 CSF1P09603 554 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 LINC00271P0C7V0 271 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 CLCN3P51790 818 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 MVDP53602 400 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ARHGAP8P85298 464 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ECT2LQ008S8 904 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SLC18A2Q05940 514 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SULT6B1Q6IMI4 303 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 PLEKHA7Q6IQ23 1121 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 XRRA1Q6P2D8 792 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 PGBD2Q6P3X8 592 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SYT13Q7L8C5 426 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SLC26A9Q7LBE3 791 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 RASGRP2Q7LDG7 609 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SHFQ7M4L6 423 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SFTPA2Q8IWL1 248 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 GHDCQ8N2G8 530 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ATG16L2Q8NAA4 619 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SETD9Q8NE22 299 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ARRDC2Q8TBH0 407 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 NCSTNQ92542 709 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 FIG4Q92562 907 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 C3orf30Q96M34 536 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 YME1L1Q96TA2 773 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 CSF3RQ99062 836 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 HERC2P3Q9BVR0 1158 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 PLEKHA2Q9HB19 425 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 LRRC4Q9HBW1 653 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ZNF334Q9HCZ1 680 aaPredicted RBP2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 NOX4Q9NPH5 578 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ATP8A2Q9NTI2 1148 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 ZFP57Q9NU63 452 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 SPATS2LQ9NUQ6 558 aaKnown RBP2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 IFT80Q9P2H3 777 aaPredicted RBP2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 TCF19Q9Y242 345 aa2.41□□□□□ -2.02
RNU4-42P-201ENST00000364738 H0Y3Z8 333 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 KRT38O76015 456 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 SERPINC1P01008 464 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 KRT18P05783 430 aaKnown RBP2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 CD72P21854 359 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 PDIA3P30101 505 aaKnown RBP2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 SERPINF1P36955 418 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 CENPAP49450 140 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 ARSFP54793 590 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 GOLGA8FQ08AF8 430 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 GALNT1Q10472 559 aaPredicted RBP2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 CHAF1AQ13111 956 aaPredicted RBP2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 FCN2Q15485 313 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 PLA2G4FQ68DD2 849 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 C19orf48Q6RUI8 117 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF485Q8NCK3 441 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 KCNH5Q8NCM2 988 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 OR13A1Q8NGR1 328 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 GOLGA1Q92805 767 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 TANKQ92844 425 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 OTULINQ96BN8 352 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 CCDC136Q96JN2 1154 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 EGLN1Q9GZT9 426 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 CTDSP1Q9GZU7 261 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 ANKRD10Q9NXR5 420 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 HDAC6Q9UBN7 1215 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 SLC9A2Q9UBY0 812 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 SLCO3A1Q9UIG8 710 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 CLDN16Q9Y5I7 305 aa2.4□□□□□ -2.03
RNU4-42P-201ENST00000364738 A0A0G2JPF8 293 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 HMX3A6NHT5 357 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 HNRNPCL3B7ZW38 293 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 E7EVH7 732 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 C16orf97H3BN30 126 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 HSPA12AO43301 675 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZIC3O60481 467 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 HNRNPCL1O60812 293 aaKnown RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 CAND2O75155 1236 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ATP2C2O75185 946 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ADAP00813 363 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 HNRNPCL4P0DMR1 293 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 MCM3P25205 808 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms