RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 SGSM3Q96HU1 749 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 SRPK1Q96SB4 655 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 GBA3Q9H227 469 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 MANSC1Q9H8J5 431 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 UGT1A7Q9HAW7 530 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 UGT1A10Q9HAW8 530 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 UGT1A8Q9HAW9 530 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 WDR6Q9NNW5 1121 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 FBXO5Q9UKT4 447 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 APOBEC2Q9Y235 224 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 FAM95CA0A1B0GW59 222 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 LINC01553A4QN01 128 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 TMEM189-UBE2V1I3L0A0 370 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 K7ERQ8 282 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 TPP1O14773 563 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 GABBR2O75899 941 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 NFATC1O95644 943 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 AP2A1O95782 977 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 FYNP06241 537 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 RGS4P49798 205 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 SERPINB8P50452 374 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 PPIDQ08752 370 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 ITGA9Q13797 1035 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 DDX39BQ13838 428 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 PM20D1Q6GTS8 502 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 FAM109BQ6ICB4 259 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC8B1Q6J4K2 584 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 OTOAQ7RTW8 1153 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 RIBC1Q8N443 379 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 HIPK4Q8NE63 616 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 KLK6Q92876 244 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 KHSRPQ92945 711 aaKnown RBP eCLIP5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 AGAP2Q99490 1192 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 FAM167BQ9BTA0 163 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 PRKD2Q9BZL6 878 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC25A51Q9H1U9 297 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 NOD2Q9HC29 1040 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 NSMCE4AQ9NXX6 385 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 ZNF510Q9Y2H8 683 aa5.55□□□□□ -1.52
PCDH11X-202ENST00000361655 CLUHO75153 1309 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 KIAA0355O15063 1070 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 INSIG1O15503 277 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 CHEK2O96017 543 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 ALPIP09923 528 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 ESRRAP11474 423 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 TSPAN8P19075 237 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 SOX11P35716 441 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 MAPKAPK2P49137 400 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 NDST2P52849 883 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 STX1BP61266 288 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 POLR2LP62875 67 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 MPP1Q00013 466 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 IL10RBQ08334 325 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 SGCGQ13326 291 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 PDCD2Q16342 344 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 FBXO48Q5FWF7 155 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 PPM1JQ5JR12 505 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 GRAMD4Q6IC98 578 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 USP45Q70EL2 814 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 PRPF39Q86UA1 669 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 EXOC3L1Q86VI1 746 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 TMEM25Q86YD3 366 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 DENND6AQ8IWF6 608 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 OR52K2Q8NGK3 314 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 ARMC5Q96C12 935 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 KLHL29Q96CT2 875 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 LRRC39Q96DD0 335 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 DNAJC1Q96KC8 554 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 KLHL32Q96NJ5 620 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 ACSS3Q9H6R3 686 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 CWH43Q9H720 699 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 PRDM16Q9HAZ2 1276 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 ZNF334Q9HCZ1 680 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 CATSPERZQ9NTU4 200 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 ZDHHC18Q9NUE0 388 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 STK39Q9UEW8 545 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 SLCO3A1Q9UIG8 710 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 RNF112Q9ULX5 631 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 KCTD3Q9Y597 815 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 PCDHA11Q9Y5I1 949 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 BRCA1P38398 1863 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 GOLGA8QA0A0J9YX86 632 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 A0A0U1RQS6 177 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 LOC100653049A0A140TA62 436 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 GOLGA8OA6NCC3 632 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 F8W8V4 182 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 GOLGA8NF8WBI6 632 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 SH3BGRLO75368 114 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 KRT34O76011 436 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 PIGNO95427 931 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 PABPC1P11940 636 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 LPOP22079 712 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 MC4RP32245 332 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 HNRNPH2P55795 449 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 IMPG1Q17R60 797 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 TCTN1Q2MV58 587 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 SETMARQ53H47 684 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 AGAP9Q5VTM2 703 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 LRRC8BQ6P9F7 803 aa5.54□□□□□ -1.52
PCDH11X-202ENST00000361655 SPATA21Q7Z572 469 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms