RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ARSIQ5FYB1 569 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 KDELC1Q6UW63 502 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 TMEM105Q8N8V8 129 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 OR2T3Q8NH03 318 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 ZNF641Q96N77 438 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 ERP44Q9BS26 406 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 TRIM51Q9BSJ1 452 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 MLPHQ9BV36 600 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 RSPH9Q9H1X1 276 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 POLR3BQ9NW08 1133 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 IL36AQ9UHA7 158 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 AAR2Q9Y312 384 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 H0Y858 1186 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 TRAFD1O14545 582 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 PSMD3O43242 534 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 LEFTY1O75610 366 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 PRNPP04156 253 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 ADCY8P40145 1251 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 MAGEA6P43360 314 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 VPS41P49754 854 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 MPP3Q13368 585 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 DUPD1Q68J44 220 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 KCTD11Q693B1 232 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 C8orf74Q6P047 294 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 GDPD4Q6W3E5 623 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 DSG4Q86SJ6 1040 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 CAMK1DQ8IU85 385 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 HCAR2Q8TDS4 363 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 ATOH1Q92858 354 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 LRRC45Q96CN5 670 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 OSBPL1AQ9BXW6 950 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 ZDHHC6Q9H6R6 413 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 C2orf42Q9NWW7 574 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 UBP1Q9NZI7 540 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 ASIC3Q9UHC3 531 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 SARDHQ9UL12 918 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 PCDHGC4Q9Y5F7 938 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 RAI2Q9Y5P3 530 aa12.53□□□□□ -0.4
NIF3L1-201ENST00000359683 ERI2A8K979 691 aaKnown RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 F5H423 210 aaPredicted RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 FZD6O60353 706 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 SOCS5O75159 536 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 PIGNO95427 931 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 EPOP01588 193 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 SERPINA4P29622 427 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 DGKEP52429 567 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 DRG2P55039 364 aaKnown RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 WNT3AP56704 352 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 RPS14P62263 151 aaKnown RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 SATB1Q01826 763 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 TRAF2Q12933 501 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 MTAPQ13126 283 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 TMPRSS6Q8IU80 811 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 MMAAQ8IVH4 418 aaKnown RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 TAB3Q8N5C8 712 aaPredicted RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 PIP4K2CQ8TBX8 421 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 ECHDC3Q96DC8 303 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 MRGPRX2Q96LB1 330 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 TDRD1Q9BXT4 1180 aaKnown RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 MKRN2Q9H000 416 aaKnown RBP12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 IRF2BPLQ9H1B7 796 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 DKK3Q9UBP4 350 aa12.52□□□□□ -0.4
NIF3L1-201ENST00000359683 LOC285095A0A1B0GVY8 99 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 A0A1W2PQ67 120 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 GOLGA6CA6NDK9 693 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 GOLGA6BA6NDN3 693 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 EFCAB8A8MWE9 144 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 DNALI1O14645 258 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 GFRA3O60609 400 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 RNASEH1O60930 286 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 PMPCBO75439 489 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 AP2A1O95782 977 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 PRLP01236 227 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 UGT2B4P06133 528 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 GOLGA6DP0CG33 693 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 ADRA1AP35348 466 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 NUBP1P53384 320 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 TUBB4BP68371 445 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 CDK18Q07002 472 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 ZNF805Q5CZA5 627 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 FAM46CQ5VWP2 391 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 RANBP10Q6VN20 620 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 PDCD7Q8N8D1 485 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 GRIN3AQ8TCU5 1115 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 SEC14L1Q92503 715 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 CPT1BQ92523 772 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 ERLEC1Q96DZ1 483 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 KLHL32Q96NJ5 620 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 TRIB3Q96RU7 358 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms