RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 USP15Q9Y4E8 981 aaPredicted RBP17.38■□□□□ 0.37
VPS13B-201ENST00000355155 CHRNA4P43681 627 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 SLC20A2Q08357 652 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 POU6F1Q14863 301 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 ZKSCAN8Q15776 578 aaPredicted RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 LACTB2Q53H82 288 aaPredicted RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 CCDC91Q7Z6B0 441 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 ZNF557Q8N988 423 aaPredicted RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 LRRC8CQ8TDW0 803 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 TDRD1Q9BXT4 1180 aaKnown RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 LMAN2LQ9H0V9 348 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 ATXN3LQ9H3M9 355 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 FGFR1OP2Q9NVK5 253 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 TXNDC16Q9P2K2 825 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 SLC17A6Q9P2U8 582 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 FZD6O60353 706 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 PENKP01210 267 aaPredicted RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 LEPRP48357 1165 aaKnown RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 VASPP50552 380 aaPredicted RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 FSCBQ5H9T9 825 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 CMTM8Q8IZV2 173 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 NDUFAF2Q8N183 169 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 MAB21L3Q8N8X9 362 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 OR6Y1Q8NGX8 325 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 KLF6Q99612 283 aaPredicted RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 MLXIPLQ9NP71 852 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 MAN1C1Q9NR34 630 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 IARS2Q9NSE4 1012 aaKnown RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 SMPD4Q9NXE4 827 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 CFAP97Q9P2B7 532 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 CORO1CQ9ULV4 474 aaPredicted RBP17.37■□□□□ 0.37
VPS13B-201ENST00000355155 SH3BP1Q9Y3L3 701 aa17.37■□□□□ 0.37
VPS13B-201ENST00000355155 GOLGA8RI6L899 631 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 PRLP01236 227 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 GABRB3P28472 473 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 KIAA0907Q7Z7F0 614 aaPredicted RBP17.36■□□□□ 0.37
VPS13B-201ENST00000355155 KDM4CQ9H3R0 1056 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 SNX15Q9NRS6 342 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 MARK1Q9P0L2 795 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 GGT7Q9UJ14 662 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 A0A1W2PRU2 124 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 TSPAN3O60637 253 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 GLDCP23378 1020 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 CCDC153Q494R4 210 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 ARHGAP15Q53QZ3 475 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 SPDYAQ5MJ70 313 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 SPATA21Q7Z572 469 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 STYXQ8WUJ0 223 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 OTUB2Q96DC9 234 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 VPS39Q96JC1 886 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 FAM111AQ96PZ2 611 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 MANSC1Q9H8J5 431 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 NOD2Q9HC29 1040 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 KIAA1522Q9P206 1035 aaPredicted RBP17.36■□□□□ 0.37
VPS13B-201ENST00000355155 ANKRD36A6QL64 1941 aa17.36■□□□□ 0.37
VPS13B-201ENST00000355155 GRM6O15303 877 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 PLIN3O60664 434 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 XYLBO75191 536 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 ARHGEF15O94989 841 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 BPGMP07738 259 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 RGRP47804 291 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 ITKQ08881 620 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 CCDC15Q0P6D6 951 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 ZNF77Q15935 545 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 BBS7Q8IWZ6 715 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 TDRD5Q8NAT2 981 aaKnown RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 ATP2A3Q93084 1043 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 CORO1BQ9BR76 489 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 MTO1Q9Y2Z2 717 aaKnown RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 H0Y626 953 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 CCL16O15467 120 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 TMCC1O94876 653 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 WISP3O95389 354 aaPredicted RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 PROCP04070 461 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 MZF1P28698 734 aaPredicted RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 RPL26P61254 145 aaKnown RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 AP1S1P61966 158 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 SEPT7Q16181 437 aaKnown RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 ISG20Q96AZ6 181 aaKnown RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 IFT43Q96FT9 208 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 C7orf26Q96N11 449 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 PCMTD2Q9NV79 361 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 KLHL14Q9P2G3 628 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 SLC2A6Q9UGQ3 507 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 PHTF1Q9UMS5 762 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 RPL26L1Q9UNX3 145 aaKnown RBP17.35■□□□□ 0.37
VPS13B-201ENST00000355155 ARL2BPQ9Y2Y0 163 aa17.35■□□□□ 0.37
VPS13B-201ENST00000355155 SNNO75324 88 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 AHSGP02765 367 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 CKMP06732 381 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 CSKP41240 450 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 PCSK7Q16549 785 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 ZNF354CQ86Y25 554 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 CCT6BQ92526 530 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 ZNF707Q96C28 371 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 ELAC2Q9BQ52 826 aaKnown RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 PITPNM3Q9BZ71 974 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 MUC3BQ9H195 1237 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms