RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 CDH17Q12864 832 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 DNAJC21Q5F1R6 531 aaKnown RBP20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 EGFLAMQ63HQ2 1017 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 DENND5AQ6IQ26 1287 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 ZNF366Q8N895 744 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 EZH1Q92800 747 aaPredicted RBP20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 PTPRN2Q92932 1015 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 TDRD1Q9BXT4 1180 aaKnown RBP20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 TXLNGYQ9BZA5 131 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 TMEM245Q9H330 911 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 ARNT2Q9HBZ2 717 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 CHKBQ9Y259 395 aa20.32■□□□□ 0.84
SIGMAR1-202ENST00000353468 ALOX15BO15296 676 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 HNRNPLP14866 589 aaKnown RBP eCLIP20.31■□□□□ 0.843e-31■■■■■ 27.3
SIGMAR1-202ENST00000353468 DRD1P21728 446 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 GKP32189 559 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 MAGEA4P43358 317 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 SESN2P58004 480 aaPredicted RBP20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 BCL2L1Q07817 233 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 GRSF1Q12849 480 aaKnown RBP eCLIP20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 TRAF2Q12933 501 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 E2F5Q15329 346 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 SERPINA13PQ6UXR4 307 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 RELL1Q8IUW5 271 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 SLC25A41Q8N5S1 370 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 TRIB3Q96RU7 358 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 CPEB1Q9BZB8 566 aaKnown RBP20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 MTG2Q9H4K7 406 aa20.31■□□□□ 0.84
SIGMAR1-202ENST00000353468 C19orf67A6NJJ6 358 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 WASH3PC4AMC7 463 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 PIGNO95427 931 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 NDST3O95803 873 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 EGFP01133 1207 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 HLA-EP13747 358 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 CA4P22748 312 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 IL12RB1P42701 662 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 KIR2DL1P43626 348 aaPredicted RBP20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 CHRNA4P43681 627 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 NPY2RP49146 381 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 PMS2P54278 862 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 GRM3Q14832 879 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 FASTKD3Q14CZ7 662 aaKnown RBP20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 SLC1A5Q15758 541 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 HNRNPA1L2Q32P51 320 aaKnown RBP20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 HP1BP3Q5SSJ5 553 aaPredicted RBP20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 FSTL4Q6MZW2 842 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 CAMK1DQ8IU85 385 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 ZBED8Q8IZ13 594 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 AGGF1Q8N302 714 aaeCLIP20.3■□□□□ 0.841e-12■■■□□ 15.2
SIGMAR1-202ENST00000353468 ZNF513Q8N8E2 541 aaPredicted RBP20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 CHST14Q8NCH0 376 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 SIGLEC10Q96LC7 697 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 TUBGCP5Q96RT8 1024 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 HEPHQ9BQS7 1158 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 ATP13A3Q9H7F0 1226 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 ZDHHC4Q9NPG8 344 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 BFARQ9NZS9 450 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 SORCS3Q9UPU3 1222 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 ANKRD36A6QL64 1941 aa20.3■□□□□ 0.84
SIGMAR1-202ENST00000353468 F5P12259 2224 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 EDDM13A0A1B0GTR0 161 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SDR42E2A6NKP2 422 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 NPC1O15118 1278 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 PRLP01236 227 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 ATXN1LP0C7T5 689 aaKnown RBP20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 TPH1P17752 444 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 HLA-DPA1P20036 260 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 MGAT1P26572 445 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SIRPB2Q5JXA9 342 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 PDCD6IPQ8WUM4 868 aaKnown RBP20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 FAM3CQ92520 227 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 VOPP1Q96AW1 172 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 LRRC39Q96DD0 335 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 ACOX2Q99424 681 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SEMA4AQ9H3S1 761 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 ZDHHC6Q9H6R6 413 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SUN2Q9UH99 717 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 TEX264Q9Y6I9 313 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 MUC22E2RYF6 1773 aaPredicted RBP20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SHISA7A6NL88 538 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 TRAFD1O14545 582 aaPredicted RBP20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 HTRA2O43464 458 aaPredicted RBP20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SOCS5O75159 536 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 PDHA1P08559 390 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 PRKCHP24723 683 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SERPINA4P29622 427 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 TIE1P35590 1138 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 ELK3P41970 407 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 SEC13P55735 322 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 CERCAMQ5T4B2 595 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 TPRG1Q6ZUI0 275 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 ANKMY2Q8IV38 441 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 MPP5Q8N3R9 675 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 MREGQ8N565 214 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 FBXO36Q8NEA4 188 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 PYROXD1Q8WU10 500 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 ATXN2LQ8WWM7 1075 aaKnown RBP20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 C9orf72Q96LT7 481 aa20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 CDC42EP4Q9H3Q1 356 aaKnown RBP20.29■□□□□ 0.84
SIGMAR1-202ENST00000353468 CACNA2D2Q9NY47 1150 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms