RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CDKN2BP42772 138 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 MAPK8P45983 427 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 MARCKSL1P49006 195 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 AP1S1P61966 158 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 HNRNPDQ14103 355 aaKnown RBP22.34■■□□□ 1.17
SNX3-202ENST00000349379 TEAD4Q15561 434 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 IFI16Q16666 785 aaKnown RBP22.34■■□□□ 1.17
SNX3-202ENST00000349379 SETMARQ53H47 684 aaPredicted RBP22.34■■□□□ 1.17
SNX3-202ENST00000349379 KIAA1161Q6NSJ0 714 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 DAAM2Q86T65 1068 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 KIAA1328Q86T90 577 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 ZSCAN30Q86W11 494 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 KATNAL2Q8IYT4 538 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 MINDY1Q8N5J2 469 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 RNF25Q96BH1 459 aaPredicted RBP22.34■■□□□ 1.17
SNX3-202ENST00000349379 ECHDC3Q96DC8 303 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 DESI2Q9BSY9 194 aa22.34■■□□□ 1.17
SNX3-202ENST00000349379 DNAAF2Q9NVR5 837 aaKnown RBP22.34■■□□□ 1.17
SNX3-202ENST00000349379 CNOT1A5YKK6 2376 aaKnown RBP22.34■■□□□ 1.17
SNX3-202ENST00000349379 VILLO15195 856 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 TSPAN6O43657 245 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 PCDH8O95206 1070 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 WNT1P04628 370 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 TNNT1P13805 278 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 TIMP2P16035 220 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 MX2P20592 715 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 CCNCP24863 283 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 MMP13P45452 471 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 SUOXP51687 545 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 ZNF235Q14590 738 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 MARC1Q5VT66 337 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 SEL1L3Q68CR1 1132 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 TIGD7Q6NT04 549 aaPredicted RBP22.33■■□□□ 1.17
SNX3-202ENST00000349379 LAYNQ6UX15 382 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 ZSWIM9Q86XI8 627 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 CAMK1DQ8IU85 385 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 BBS5Q8N3I7 341 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 LRRC57Q8N9N7 239 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 TMEM145Q8NBT3 493 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 NSMCE1Q8WV22 266 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 SPOCK2Q92563 424 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 KRT35Q92764 455 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 SERAC1Q96JX3 654 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 NUDCD1Q96RS6 583 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 GTPBP2Q9BX10 602 aaKnown RBP22.33■■□□□ 1.17
SNX3-202ENST00000349379 ATP13A3Q9H7F0 1226 aa22.33■■□□□ 1.17
SNX3-202ENST00000349379 A0A0U1RQJ8 604 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 TRAFD1O14545 582 aaPredicted RBP22.32■■□□□ 1.16
SNX3-202ENST00000349379 APOL1O14791 398 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 MATN3O15232 486 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 CD38P28907 300 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 CTNNA1P35221 906 aaKnown RBP22.32■■□□□ 1.16
SNX3-202ENST00000349379 SCNN1BP51168 640 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 ATXN3P54252 364 aaPredicted RBP22.32■■□□□ 1.16
SNX3-202ENST00000349379 RPS21P63220 83 aaKnown RBP22.32■■□□□ 1.16
SNX3-202ENST00000349379 KIF19Q2TAC6 998 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 RALGPS1Q5JS13 557 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 ALG1LQ6GMV1 187 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 BRAT1Q6PJG6 821 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 IL27RAQ6UWB1 636 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 TTC7BQ86TV6 843 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 TXLNBQ8N3L3 684 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 OR2I1PQ8NGU4 316 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.32■■□□□ 1.16
SNX3-202ENST00000349379 FEM1CQ96JP0 617 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 OLFM3Q96PB7 478 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 GGT7Q9UJ14 662 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 ITM2BQ9Y287 266 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 ANKRD6Q9Y2G4 727 aa22.32■■□□□ 1.16
SNX3-202ENST00000349379 GRID2IPA4D2P6 1211 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 PRAMEF26H0Y7S4 382 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 ZFXP17010 805 aaPredicted RBP22.31■■□□□ 1.16
SNX3-202ENST00000349379 SERPINA4P29622 427 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 CTSKP43235 329 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 PPIDQ08752 370 aaKnown RBP22.31■■□□□ 1.16
SNX3-202ENST00000349379 FGL2Q14314 439 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 UGP2Q16851 508 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 SPOCD1Q6ZMY3 1216 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 MFSD2AQ8NA29 543 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 EXD1Q8NHP7 514 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 ASB12Q8WXK4 309 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 MAK16Q9BXY0 300 aaKnown RBP22.31■■□□□ 1.16
SNX3-202ENST00000349379 GRPEL1Q9HAV7 217 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 TRIM10Q9UDY6 481 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 AMACRQ9UHK6 382 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 SNX11Q9Y5W9 270 aa22.31■■□□□ 1.16
SNX3-202ENST00000349379 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.3■■□□□ 1.16
SNX3-202ENST00000349379 UPK3BL1B0FP48 263 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 UPK3BL2E5RIL1 263 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 SLC31A1O15431 190 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 HTRA2O43464 458 aaPredicted RBP22.3■■□□□ 1.16
SNX3-202ENST00000349379 ZRANB2O95218 330 aaKnown RBP eCLIP22.3■■□□□ 1.16
SNX3-202ENST00000349379 ZNF883P0CG24 379 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 MAXP61244 160 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 BCL2L1Q07817 233 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 KIF5AQ12840 1032 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 ODF2Q5BJF6 829 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 LRRC73Q5JTD7 316 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 IQCHQ86VS3 1027 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 RFX6Q8HWS3 928 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms