RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 C21orf59P57076 290 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 SESN2P58004 480 aaPredicted RBP16.03■□□□□ 0.16
HMGA1-202ENST00000347617 NAA20P61599 178 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 ITGA7Q13683 1181 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 FBXO47Q5MNV8 452 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 SAMD4BQ5PRF9 694 aaKnown RBP16.03■□□□□ 0.16
HMGA1-202ENST00000347617 PAOXQ6QHF9 649 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 STRA8Q7Z7C7 330 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 HERC6Q8IVU3 1022 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 CHPT1Q8WUD6 406 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 TFAP2CQ92754 450 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 ATP6V1E2Q96A05 226 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
HMGA1-202ENST00000347617 HNRNPABQ99729 332 aaKnown RBP16.03■□□□□ 0.16
HMGA1-202ENST00000347617 OXCT2Q9BYC2 517 aaPredicted RBP16.03■□□□□ 0.16
HMGA1-202ENST00000347617 ACE2Q9BYF1 805 aaPredicted RBP16.03■□□□□ 0.16
HMGA1-202ENST00000347617 WDR55Q9H6Y2 383 aaPredicted RBP16.03■□□□□ 0.16
HMGA1-202ENST00000347617 ADA2Q9NZK5 511 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 GIT1Q9Y2X7 761 aa16.03■□□□□ 0.16
HMGA1-202ENST00000347617 TRIP11Q15643 1979 aa16.02■□□□□ 0.16
HMGA1-202ENST00000347617 ERI2A8K979 691 aaKnown RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PSMD12O00232 456 aaPredicted RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 TRIM24O15164 1050 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 NOL3O60936 208 aaKnown RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 DDHD2O94830 711 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 OCM2P0CE71 109 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 OCMP0CE72 109 aaPredicted RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PTPN1P18031 435 aaKnown RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PAX3P23760 479 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 DPP6P42658 865 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 STT3AP46977 705 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 BCAP31P51572 246 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 ACLYP53396 1101 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 GBE1Q04446 702 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 SQLEQ14534 574 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 NRF1Q16656 503 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 CA9Q16790 459 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 ANO4Q32M45 955 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PPP6R3Q5H9R7 873 aaPredicted RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 NHSL2Q5HYW2 709 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 ELMSAN1Q6PJG2 1045 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 OLFML1Q6UWY5 402 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 ZBTB49Q6ZSB9 765 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 CAMK1DQ8IU85 385 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 CENPIQ92674 756 aaPredicted RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 ZUFSPQ96AP4 578 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 TMA16Q96EY4 203 aaKnown RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PLEKHA8Q96JA3 519 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 TWNKQ96RR1 684 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 TDRD1Q9BXT4 1180 aaKnown RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 FTHL17Q9BXU8 183 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 RNF39Q9H2S5 420 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PFDN4Q9NQP4 134 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 C20orf96Q9NUD7 363 aaPredicted RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 FAM105AQ9NUU6 356 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 SYBUQ9NX95 663 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 SEPT3Q9UH03 358 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PACSIN3Q9UKS6 424 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PCDHGA7Q9Y5G6 932 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 COPG1Q9Y678 874 aaKnown RBP16.02■□□□□ 0.15
HMGA1-202ENST00000347617 SLC30A1Q9Y6M5 507 aa16.02■□□□□ 0.15
HMGA1-202ENST00000347617 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-202ENST00000347617 NEMP1O14524 444 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 SNAP91O60641 907 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 FKTNO75072 461 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 ALDH2P05091 517 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 C2P06681 752 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 DNAJB2P25686 324 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 ARL4AP40617 200 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 GRIA4P48058 902 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 TAF6P49848 677 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 GRSF1Q12849 480 aaKnown RBP eCLIP16.01■□□□□ 0.15
HMGA1-202ENST00000347617 MPP3Q13368 585 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 PSMD5Q16401 504 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 SV2CQ496J9 727 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 NXNQ6DKJ4 435 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 FSTL4Q6MZW2 842 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 FAM45BPQ6NSW5 357 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 TTC33Q6PID6 262 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-202ENST00000347617 DCDC5Q6ZRR9 648 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 CMC1Q7Z7K0 106 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 TNS4Q8IZW8 715 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 CRYBG2Q8N1P7 616 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 PLD6Q8N2A8 252 aaKnown RBP16.01■□□□□ 0.15
HMGA1-202ENST00000347617 FAM45AQ8TCE6 357 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 LRTOMTQ8WZ04 291 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 SLC35B4Q969S0 331 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 C18orf25Q96B23 403 aaPredicted RBP16.01■□□□□ 0.15
HMGA1-202ENST00000347617 PPP1R10Q96QC0 940 aaKnown RBP16.01■□□□□ 0.15
HMGA1-202ENST00000347617 SNX25Q9H3E2 840 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 SPAG4Q9NPE6 437 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 ZNF358Q9NW07 568 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 DTLQ9NZJ0 730 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 BFARQ9NZS9 450 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 SLC17A6Q9P2U8 582 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 HESX1Q9UBX0 185 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 TLK1Q9UKI8 766 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 AP4E1Q9UPM8 1137 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms