RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TSPAN1O60635 241 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 ODC1P11926 461 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 NCK1P16333 377 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 TPP2P29144 1249 aaPredicted RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 PPP1R8Q12972 351 aaKnown RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 MBLAC2Q68D91 279 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 ANKS6Q68DC2 871 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 STRADAQ7RTN6 431 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 KIAA2013Q8IYS2 634 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 GIPC3Q8TF64 312 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 MTFMTQ96DP5 389 aaKnown RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 PLEKHG4BQ96PX9 1271 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 PCYT2Q99447 389 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 ASPSCR1Q9BZE9 553 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 KCNK13Q9HB14 408 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 DNAJC28Q9NX36 388 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 MYBPHLA2RUH7 354 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 AP2A1O95782 977 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 OCM2P0CE71 109 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 OCMP0CE72 109 aaPredicted RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 FGF3P11487 239 aaPredicted RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 LHX1P48742 406 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 TRPC1P48995 793 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 SERPINH1P50454 418 aaKnown RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 RENBPP51606 427 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 CCR3P51677 355 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 RALGPS2Q86X27 583 aaPredicted RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 ACTRT2Q8TDY3 377 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 HEXDCQ8WVB3 486 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 FBXO32Q969P5 355 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 RHOBTB2Q9BYZ6 727 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 C20orf27Q9GZN8 174 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 BPIFA1Q9NP55 256 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 PIGVQ9NUD9 493 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 GIMAP2Q9UG22 337 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 TMEM114B3SHH9 223 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 HS6ST1O60243 411 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 FOXD2O60548 495 aaPredicted RBP12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC2A3P11169 496 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 PRKCHP24723 683 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 PSMB9P28065 219 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 CDC42EP1Q00587 391 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 LRRC74AQ0VAA2 488 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 NAB1Q13506 487 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 OLFML1Q6UWY5 402 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 PATL1Q86TB9 770 aaKnown RBP12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC22A9Q8IVM8 553 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 ZNF778Q96MU6 729 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 MRPS26Q9BYN8 205 aaKnown RBP12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 ADAM28Q9UKQ2 775 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 BLOC1S6Q9UL45 172 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 ANKRD6Q9Y2G4 727 aa12.52□□□□□ -0.4
SNRNP48-201ENST00000342415 A6NHS1 94 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 E7ESA3 106 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 TRAFD1O14545 582 aaPredicted RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 FFAR3O14843 346 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 GPR42O15529 346 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 MAN1A2O60476 641 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 CLASP2O75122 1294 aaKnown RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 CELF2O95319 508 aaKnown RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 MLNP12872 115 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 AOC1P19801 751 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 YAP1P46937 504 aaKnown RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 PIK3CGP48736 1102 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 INSCQ1MX18 579 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 LPCAT1Q8NF37 534 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 MRPL57Q9BQC6 102 aaKnown RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 ALS2Q96Q42 1657 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 A0A0J9YYE9 177 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 OR51F1A6NGY5 319 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 TOMM70O94826 608 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 PIGRP01833 764 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 OR4Q2P0C623 313 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 CCDC85BQ15834 202 aaPredicted RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 CNSTQ6PJW8 725 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 HEATR4Q86WZ0 1026 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 PGAM4Q8N0Y7 254 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 BPIFB6Q8NFQ5 453 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 SMARCD1Q96GM5 515 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 HGH1Q9BTY7 390 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 WWOXQ9NZC7 414 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 RAD54BQ9Y620 910 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 SDK1Q7Z5N4 2213 aa12.52□□□□□ -0.41
SNRNP48-201ENST00000342415 PDHXO00330 501 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 RAMP2O60895 175 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 YWHAQP27348 245 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 GRM5P41594 1212 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ETV4P43268 484 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 GALNT3Q14435 633 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ADCY4Q8NFM4 1077 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 PPM1MQ96MI6 270 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 CINPQ9BW66 212 aaPredicted RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ZFP14Q9HCL3 533 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms