RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CCNYQ8ND76 341 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 C1orf216Q8TAB5 229 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 SLC6A18Q96N87 628 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 DESI2Q9BSY9 194 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 GOLPH3Q9H4A6 298 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 SUV39H2Q9H5I1 410 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 SCUBE2Q9NQ36 999 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 FSCN3Q9NQT6 498 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 DLL3Q9NYJ7 618 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 HEY1Q9Y5J3 304 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 FADS3Q9Y5Q0 445 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 TP53BP1Q12888 1972 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-202ENST00000340477 A0A1B0GVT2 93 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 PRAMEF26H0Y7S4 382 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 RNF103O00237 685 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 PPP1R12AO14974 1030 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-202ENST00000340477 INSIG1O15503 277 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 MAGEC1O60732 1142 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 NFKBIAP25963 317 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 CD38P28907 300 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 AKT2P31751 481 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 CSNK1EP49674 416 aaKnown RBP19.4■□□□□ 0.7
SYNE4-202ENST00000340477 GBE1Q04446 702 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 ELP6Q0PNE2 266 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 STAT4Q14765 748 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 RALGPS1Q5JS13 557 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 SLC9A4Q6AI14 798 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 BZW1Q7L1Q6 419 aaKnown RBP19.4■□□□□ 0.7
SYNE4-202ENST00000340477 KATNAL2Q8IYT4 538 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 SYCE1Q8N0S2 351 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 KIAA1524Q8TCG1 905 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 CXorf40AQ8TE69 158 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 TSGA10Q9BZW7 698 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 GRPEL1Q9HAV7 217 aa19.4■□□□□ 0.7
SYNE4-202ENST00000340477 TRPM6Q9BX84 2022 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 MACROD2A1Z1Q3 448 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 RCCD1A6NED2 376 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 C3orf70A6NLC5 250 aaPredicted RBP19.39■□□□□ 0.69
SYNE4-202ENST00000340477 ARHGAP6O43182 974 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 ZRANB2O95218 330 aaKnown RBP eCLIP19.39■□□□□ 0.69
SYNE4-202ENST00000340477 MAP3K6O95382 1288 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 CCNCP24863 283 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 CETN2P41208 172 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 ABL2P42684 1182 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 POLR2LP62875 67 aaKnown RBP19.39■□□□□ 0.69
SYNE4-202ENST00000340477 DYNLT1P63172 113 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 ITKQ08881 620 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 SGCGQ13326 291 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 HNRNPDQ14103 355 aaKnown RBP19.39■□□□□ 0.69
SYNE4-202ENST00000340477 MFSD7Q6UXD7 560 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 DGLUCYQ7Z3D6 616 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 CCDC13Q8IYE1 715 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 RCOR2Q8IZ40 523 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 ANP32BQ92688 251 aaKnown RBP19.39■□□□□ 0.69
SYNE4-202ENST00000340477 HDAC11Q96DB2 347 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 TSGA13Q96PP4 275 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 NUDCD1Q96RS6 583 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 MGME1Q9BQP7 344 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 ORAI3Q9BRQ5 295 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 POLR1EQ9GZS1 481 aaKnown RBP19.39■□□□□ 0.69
SYNE4-202ENST00000340477 LACRTQ9GZZ8 138 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 NT5MQ9NPB1 228 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 DTLQ9NZJ0 730 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 AMACRQ9UHK6 382 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 ANKRD6Q9Y2G4 727 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 TTLL3Q9Y4R7 772 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 DMXL1Q9Y485 3027 aa19.39■□□□□ 0.69
SYNE4-202ENST00000340477 A0A1W2PQ67 120 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 TSPAN11A1L157 253 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 CCDC66A2RUB6 948 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 UPK3BL1B0FP48 263 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 UPK3BL2E5RIL1 263 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 VILLO15195 856 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 MATN3O15232 486 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 SLC31A1O15431 190 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 HNRNPA2B1P22626 353 aaKnown RBP19.38■□□□□ 0.69
SYNE4-202ENST00000340477 RGRP47804 291 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 PDK1Q15118 436 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 TFDP3Q5H9I0 405 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 SPOCD1Q6ZMY3 1216 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 CAMK1DQ8IU85 385 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 PLD5Q8N7P1 536 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 EXD1Q8NHP7 514 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 FATE1Q969F0 183 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 C1QTNF7Q9BXJ2 289 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 BRD8Q9H0E9 1235 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 SALL4Q9UJQ4 1053 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 DUSP10Q9Y6W6 482 aa19.38■□□□□ 0.69
SYNE4-202ENST00000340477 C10orf142B7Z368 130 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 CDX4O14627 284 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-202ENST00000340477 SOCS5O75159 536 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 PEX11BO96011 259 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 PRLRP16471 622 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 TGM2P21980 687 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 CA4P22748 312 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 CES1P23141 567 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 CTNNA1P35221 906 aaKnown RBP19.37■□□□□ 0.69
SYNE4-202ENST00000340477 CDKN2BP42772 138 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 NR2C2P49116 596 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 OVGP1Q12889 678 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms