RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PKNOX1P55347 436 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 PPP2R5DQ14738 602 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 CYTH1Q15438 398 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 SLC43A3Q8NBI5 491 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 RP9Q8TA86 221 aaKnown RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 PDCD6IPQ8WUM4 868 aaKnown RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 KLHL32Q96NJ5 620 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 WDCPQ9H6R7 721 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 TMEM165Q9HC07 324 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 ARHGEF38Q9NXL2 777 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF638Q14966 1978 aaKnown RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 SH3PXD2BA1X283 911 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 M0QZQ0 153 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 KCNK1O00180 336 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 FKTNO75072 461 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 CYP11A1P05108 521 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 TXNL4AP83876 142 aaKnown RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 SEMA5AQ13591 1074 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 LPCAT2Q7L5N7 544 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF280BQ86YH2 543 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 PGAM4Q8N0Y7 254 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 TRIML2Q8N7C3 387 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 LINC01599Q8WXQ3 324 aa18.98■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF512Q96ME7 567 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-201ENST00000338910 C7orf72A4D263 438 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 TMEM221A6NGB7 291 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 DCLK1O15075 740 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 B4GALT3O60512 393 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 RNASEH2AO75792 299 aaKnown RBP18.97■□□□□ 0.63
PSPC1-201ENST00000338910 EPHA3P29320 983 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 TYK2P29597 1187 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 DPP6P42658 865 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 TPI1P60174 286 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 CRADDP78560 199 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 PAFAH1B3Q15102 231 aaKnown RBP18.97■□□□□ 0.63
PSPC1-201ENST00000338910 CCDC153Q494R4 210 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 SLC24A5Q71RS6 500 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 TKTL2Q9H0I9 626 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 EPS15L1Q9UBC2 864 aa18.97■□□□□ 0.63
PSPC1-201ENST00000338910 FAF1Q9UNN5 650 aaPredicted RBP18.97■□□□□ 0.63
PSPC1-201ENST00000338910 MKI67P46013 3256 aaKnown RBP18.97■□□□□ 0.63
PSPC1-201ENST00000338910 ARVCFO00192 962 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 ACOT8O14734 319 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 H6PDO95479 791 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 ME2P23368 584 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 NAB1Q13506 487 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 ARL13BQ3SXY8 428 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 CASC4Q6P4E1 433 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 DCLRE1AQ6PJP8 1040 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 TNS4Q8IZW8 715 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 THEM5Q8N1Q8 247 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 RNF148Q8N7C7 305 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 RNF34Q969K3 372 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 NTAN1Q96AB6 310 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 RCN3Q96D15 328 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 PKMYT1Q99640 499 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 DSEQ9UL01 958 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 TDRKHQ9Y2W6 561 aaKnown RBP18.96■□□□□ 0.63
PSPC1-201ENST00000338910 H0YJX3 145 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 STT3AP46977 705 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 GLUD2P49448 558 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 MGAT5BQ3V5L5 792 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 PM20D1Q6GTS8 502 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 TDRD5Q8NAT2 981 aaKnown RBP18.96■□□□□ 0.63
PSPC1-201ENST00000338910 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF597Q96LX8 424 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 PRDM16Q9HAZ2 1276 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 PLGRKTQ9HBL7 147 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 RRN3Q9NYV6 651 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 OR12D3Q9UGF7 316 aa18.96■□□□□ 0.63
PSPC1-201ENST00000338910 GOLGA8QA0A0J9YX86 632 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 E2F8A0AVK6 867 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 GOLGA8OA6NCC3 632 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 TMEM114B3SHH9 223 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 GOLGA8NF8WBI6 632 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 CFLARO15519 480 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 DDHD2O94830 711 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 OR4Q2P0C623 313 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 SCAPQ12770 1279 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 SEMA3BQ13214 749 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 GLB1LQ6UWU2 654 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 PID1Q7Z2X4 250 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 CARM1Q86X55 608 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 RNF168Q8IYW5 571 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-201ENST00000338910 ZNF567Q8N184 647 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 PGAP3Q96FM1 320 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-201ENST00000338910 SUSD3Q96L08 255 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 RANBP9Q96S59 729 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 WDR55Q9H6Y2 383 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-201ENST00000338910 TSC2P49815 1807 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 G3V2L1 256 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 F9P00740 461 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 PSMB4P28070 264 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 ATXN3P54252 364 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-201ENST00000338910 AIF1P55008 147 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 CLLU1OSQ5K130 101 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 TAC4Q86UU9 113 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 PLD6Q8N2A8 252 aaKnown RBP18.95■□□□□ 0.62
PSPC1-201ENST00000338910 NPWQ8N729 165 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 GRIN3AQ8TCU5 1115 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms