RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FAM171BQ6P995 826 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 RFWD3Q6PCD5 774 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 NAT16Q8N8M0 369 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ZSCAN18Q8TBC5 510 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-201ENST00000334136 SPPL3Q8TCT6 385 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 SFXN1Q9H9B4 322 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ZDHHC18Q9NUE0 388 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 SLC12A4Q9UP95 1085 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 LCHNA4D1U4 455 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 KCNU1A8MYU2 1149 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 RFXAPO00287 272 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ANGPT2O15123 496 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 IRAK2O43187 625 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 LIASO43766 372 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ANXA9O76027 345 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 CHEK2O96017 543 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 RHOP08100 348 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 CPA3P15088 417 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ANPEPP15144 967 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 PAMP19021 973 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 MSX2P35548 267 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-201ENST00000334136 NME5P56597 212 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
HDAC6-201ENST00000334136 UBAP2LQ14157 1087 aaKnown RBP11.92□□□□□ -0.5
HDAC6-201ENST00000334136 SLC8B1Q6J4K2 584 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ZBTB46Q86UZ6 589 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 TCEAL8Q8IYN2 117 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 SIKE1Q9BRV8 207 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF670Q9BS34 389 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 PCDH18Q9HCL0 1135 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF229Q9UJW7 825 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 NFATC1O95644 943 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 THRAP10827 490 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 TACR2P21452 398 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 ITGB8P26012 769 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 CDH5P33151 784 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-201ENST00000334136 SCNN1BP51168 640 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 STARD3Q14849 445 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 TEAD2Q15562 447 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 MPPE1Q53F39 396 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 OLFML1Q6UWY5 402 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 C4orf22Q6V702 233 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 PRDM16Q9HAZ2 1276 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 IL1RAPL1Q9NZN1 696 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 FNIP2Q9P278 1114 aa11.92□□□□□ -0.5
HDAC6-201ENST00000334136 NEDD8-MDP1E9PL57 170 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 APOC4-APOC2K7ER74 178 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 ADAM12O43184 909 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 RNASEH1O60930 286 aaKnown RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 AVILO75366 819 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 APOC2P02655 101 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 MTHFRP42898 656 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 PTGIRP43119 386 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 SLC1A6P48664 564 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 ATXN1P54253 815 aaKnown RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CCDC15Q0P6D6 951 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 NRF1Q16656 503 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 FAM182AQ5T1J6 154 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 PTPRN2Q92932 1015 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 PLD4Q96BZ4 506 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CYP2S1Q96SQ9 504 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CDRT15Q96T59 188 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CWH43Q9H720 699 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 COPS7BQ9H9Q2 264 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CYP4F12Q9HCS2 524 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 SARS2Q9NP81 518 aaKnown RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 DUS2Q9NX74 493 aaKnown RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 MAFFQ9ULX9 164 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF646O15015 1829 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 TPBGLP0DKB5 382 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 KCNA5P22460 613 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 RPL22P35268 128 aaKnown RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 PPARGP37231 505 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CRADDP78560 199 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 DCAF12L1Q5VU92 463 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 BRD8Q9H0E9 1235 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 EFCAB1Q9HAE3 211 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 TDP1Q9NUW8 608 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 UBA2Q9UBT2 640 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 NFS1Q9Y697 457 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CITO14578 2027 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CLUHO75153 1309 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CLDN11O75508 207 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 FOSL2P15408 326 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 SH3PXD2AQ5TCZ1 1133 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 OTOP3Q7RTS5 596 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 CLEC4FQ8N1N0 589 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 NDNQ99608 321 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 ARHGEF3Q9NR81 526 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 THAP1Q9NVV9 213 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 PKD2L2Q9NZM6 624 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 DEC1Q9P2X7 70 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 SCN10AQ9Y5Y9 1956 aa11.91□□□□□ -0.5
HDAC6-201ENST00000334136 GOLGA4Q13439 2230 aaKnown RBP11.91□□□□□ -0.5
HDAC6-201ENST00000334136 HIDE1A8MVS5 230 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 DDX6P26196 483 aaKnown RBP eCLIP11.9□□□□□ -0.56e-6■■■■□ 19.3
HDAC6-201ENST00000334136 MAPK10P53779 464 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 TSTA3Q13630 321 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms